Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0429 |
Symbol | |
ID | 1219233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 456068 |
End bp | 458551 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637236787 |
Product | hypothetical protein |
Protein accession | NP_518550 |
Protein GI | 17545148 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCAC GCCCATCGAC CGGCCCCGAC ACGCATCGCC CGCGCGCACT GCGGCAGCCC GCCGTGCTGC TGTGGCTGCT GGGCCTGCTG GCCTGCGTCG CCGTGATCGT CCGCGCGAGC TTCGTGGCCG ATCTGTCCGC CTTCCTGCCA AGCTCGCCGA GCGCCGAGCA GCGCGTGCTG GTCGACCAGT TGCGCGACGG GCTGGTGTCG CGGCTGATGC TGGTCGCGAT CGAGGGCGGC GAGCCGCCGG TGCGCGCCGA GCTGTCGCGG CGGATGGCGG CGACCCTGCG CGGCGATGCC CGGTTCGCGT CGGTCAGCAA CGGCGAGCCG GTCGGCCGGG AGCGGGACCA GCGCTTCGTC TTCGATCACC GCTACCTGCT GAGCCCGGCG GTGACGCCGC AGCGCTTTTC CGCCGACGGG CTGCACCAGG CCCTGGGCGA CAGCCTCGAC CTGCTGAGCT CGTCGGCGGG CCTCGTCGCC AAGGCCATGC TGCCGCGCGA TCCCACCGGT GAAGTGGCCG CGCTGGTCAG CCAGCTCGAC AGCAGCGCGC AGCCGCCGTC GCGCCACGGC GTCTGGGTCT CGCGCGACGG CCGGCGCGCC GTGCTGGTCG CCCAGACCGC CGGCGCCGGT GCCGACACCG ACGCGCAGGC CAGCGCCATG GCCGCCGTGC GCGGCGCCTT CGAGGCCGCC GCGCGCGCGC TGCCCGACGC CGCCGCCTGC CGCCTGCTGA TGACGGGCCC GGGCGTATTC GCCGTCGACA CGCGCGACAC CATCCGGCAC GACGTGGAGC GGCTCTCCAC GCGGAGCCTC GCCCTGATCG TCGCGCTGCT GTTCGTGGTC TACCGGTCGC CGCGCACGCT CGCGCTCGGC CTGCTGCCGG TGCTGTCGGG CGTGGCCGCG GGCGTGGCGT CGGTCAGCCT GGCGTTCGGT GCCGTCCACG GATTGACGCT CGGGTTCGGC ACCACGCTGA TCGGCGAAGC GGTGGACTAT TCGATCTATC TGTTCGTGCA ATCGGCGCAG CCGGGCGTGC GCCGGGCGGA TGCGATGCGC GGCTGGATCG CCGAGTACTG GCCGACCATC CGGCTCGGTG TGCTGACCTC CGTGTGCGGC TTTGCGTCGA TGCTGTTCTC GGGCTTTCCC GGCCTGGTGC AGCTCGGGCT GTATTCGATT GCGGGCCTGG CGACGGCCGC CCTGGTCACG CGCTTCGTGC TGCCGCATCT GCGCGGTGGG CAGGCCGCCA TCCGGGATGT CTCGTGGCTG GGCGCGGCAC TGGCGCGCGC GGCCCGGGCG GCGCCCCGGC TGCGCTGGCC GCTGGCGGCG CTGCTGGTTG CCGCCTGCGC CGGGCTCGCG CTGCACCATG ACCGGCTCTG GAACCGGGAG CTGGCCGCCC TGAGCCCGGT GCCGGCCCAG AGCCAGGCGC TCGATGCGAG CCTGCGCGCC GACGCCGGTG CGCCCGACGT GCGGTATCTG GTGGTGATCT CGGGCGCCGG CGAGCAGGCC GTGCTCGAGG GCGCCGAGAA GGTGTCGGCT CAGTTGCAGC CGCTGGTGGA TGCGGGCGTG CTCGGCGGCT ACGACAGCCC GGCGCGCTTC CTGCCGAGCG AGGCCGCGCA GCGTGCGCGC CTGGCGAGCC TGCCGAACGC CGACGCGCTC GCGGCACGCC TGCGCGCCGC CCTGGTCGAT CAGCCCATCC GCGTGAAGCC GGAACGGTTC GCGCCGTTCC TCGCCGATGT GGAGGCAGCG CGGCACCAGC CGCTGCTCAC GCGCGCGGAC CTGCGCGGCA CCTCGATGGC GCTGGCCGTC GATGCCCTGC TGACCGAACG CGCCGGCCGC TGGAGCGCGA TGCTGCCGCT GCGCGCGAGC GCCGACGCGC AAGCGCGCAG CGCCGGCCAG CCCGGCCTCG ATACCGCCCA GGTCCGTGCC GCCGTCGAGC GCGCGGGCGT GCCGGACGCG CTCTTCATCG ACATGAAGGC CGAGGCCGAC CGCCTCTATG TGAACTACGT GCGCGAAGAC ATTCGCCTGT CGCTCGCGGG CGTCGGCGCC ATCGCGCTGC TGCTGGCGAT CGCGCTGCGG TCCGCGCGGC GCGCCATGCT CGCGCTCGCG CCGCTGGCGG CCGCCGTGCT GATGGTAGCC GCCGGCTTTG CGCTGGCGGG CGTGCCGCTG ACCATCCTGC ACCTGATCGG CATGCTGCTG ATCGTCGCGG TCGGCTCGAA CTACGCGCTG TTCTTCAGCC GACGCGCCAA CGCATCGGCC GGCGCGCAGC CGGTGACGCC GCAAACCCTG GTCTCGCTGC TGATCGCCAA TCTCGCCACC GTGGCCGGCT TCGGCCTGCT GGCGCTGTCG CGGGTGCCGA TGCTGGAGAC GTTCGGGCTG ACCGTCGGCC CCGGCGCCAT CCTCGCACTG GTGTTTGCCG CCATCCTCGC GCCGGCGGCG ACACAAGCGA CCGCGCCCGC ACCGACCCAC CCCCGTCACG GAGATCCGGC ATGA
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Protein sequence | MPPRPSTGPD THRPRALRQP AVLLWLLGLL ACVAVIVRAS FVADLSAFLP SSPSAEQRVL VDQLRDGLVS RLMLVAIEGG EPPVRAELSR RMAATLRGDA RFASVSNGEP VGRERDQRFV FDHRYLLSPA VTPQRFSADG LHQALGDSLD LLSSSAGLVA KAMLPRDPTG EVAALVSQLD SSAQPPSRHG VWVSRDGRRA VLVAQTAGAG ADTDAQASAM AAVRGAFEAA ARALPDAAAC RLLMTGPGVF AVDTRDTIRH DVERLSTRSL ALIVALLFVV YRSPRTLALG LLPVLSGVAA GVASVSLAFG AVHGLTLGFG TTLIGEAVDY SIYLFVQSAQ PGVRRADAMR GWIAEYWPTI RLGVLTSVCG FASMLFSGFP GLVQLGLYSI AGLATAALVT RFVLPHLRGG QAAIRDVSWL GAALARAARA APRLRWPLAA LLVAACAGLA LHHDRLWNRE LAALSPVPAQ SQALDASLRA DAGAPDVRYL VVISGAGEQA VLEGAEKVSA QLQPLVDAGV LGGYDSPARF LPSEAAQRAR LASLPNADAL AARLRAALVD QPIRVKPERF APFLADVEAA RHQPLLTRAD LRGTSMALAV DALLTERAGR WSAMLPLRAS ADAQARSAGQ PGLDTAQVRA AVERAGVPDA LFIDMKAEAD RLYVNYVRED IRLSLAGVGA IALLLAIALR SARRAMLALA PLAAAVLMVA AGFALAGVPL TILHLIGMLL IVAVGSNYAL FFSRRANASA GAQPVTPQTL VSLLIANLAT VAGFGLLALS RVPMLETFGL TVGPGAILAL VFAAILAPAA TQATAPAPTH PRHGDPA
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