| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0413 |
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| Symbol | |
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| ID | 1219217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 439882 |
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| End bp | 440883 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236771 |
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| Product | hypothetical protein |
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| Protein accession | NP_518534 |
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| Protein GI | 17545132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0763573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTATACT TCGCCGCCAT GATAGCGAAT TTCAATCCGG ATCGAGCGCT GGCCCTGGCC
CAGCAGACCT TCGACATCGA AGCGCAGGCC GTGCTCGGTC TCAAGTCCCA GGTTTCCGCC
GACTTTGCGC GCGCGGTCGA GATGGTGCTG CGCTGCACCG GCCGCGTGGT CGTTTCGGGC
ATCGGCAAAT CCGGCCATAT CGCGCGCAAG GTGGCGGCCA CGCTCGCCTC CACCGGCACG
CCGGCGTTCT TCGTCCACCC CGCCGAAGCC AGCCACGGCG ACCTCGGCAT GGTCACGCGC
GACGACGTCT TCATCGGCTT CTCCAATTCC GGCGAGGTAT CGGAGCTGAC CGCCATCCTG
CCGCTGGTCA AGCGGCTGGG CGCCAGGCTG ATCGCCGTGA CGGGCAATCC GCAATCGTCG
CTGGCGCAGC ACGCCGACGT CATACTGAAC TCGCGCGTCG AGGTCGAGGC CTGCCCGCTC
AACCTGGCGC CGACCGCCAG CACCACCGCG CAAATGGCCC TGGGCGACGC CCTGGCCGTG
GCTCTGCTCG ATGCGCGCGG CTTCGGCGCA GACGATTTCG CCCGCTCGCA CCCCGGCGGC
TCGCTCGGGC GCAAGCTGCT CACGCACGTG CGCGACATCA TGCGCCAGGG CGACGCCGTG
CCGCGCGTGA CCGAAGACAC GCCGCTGTCG CAGGCGCTGA TGGAAATCAC CCGCAAGGGC
ATGGCGATGA CCGCCGTGGT CGACGCCACG GGCCGCGCCG TAGGGGTCTT CACCGACGGC
GACCTGCGCC GCCTGCTGGA AACCCCGCGT GACTGGCGCA CCGTGCCGAT GCACGAAGTG
ATGCACCGCA ATCCGCACGC GGTCGGCCCC GACCAGTTGG CGGTCGAGGC GGTCGAAGTG
ATGGAAACGC ATCGCATCAA CCAGCTGCTG GTGGTGGACG CCGCCGGGCA GCTGATGGGC
GCGCTGCACA TCCACGACCT GACCCGCGCC AAGGTCATCT GA
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| Protein sequence | MLYFAAMIAN FNPDRALALA QQTFDIEAQA VLGLKSQVSA DFARAVEMVL RCTGRVVVSG
IGKSGHIARK VAATLASTGT PAFFVHPAEA SHGDLGMVTR DDVFIGFSNS GEVSELTAIL
PLVKRLGARL IAVTGNPQSS LAQHADVILN SRVEVEACPL NLAPTASTTA QMALGDALAV
ALLDARGFGA DDFARSHPGG SLGRKLLTHV RDIMRQGDAV PRVTEDTPLS QALMEITRKG
MAMTAVVDAT GRAVGVFTDG DLRRLLETPR DWRTVPMHEV MHRNPHAVGP DQLAVEAVEV
METHRINQLL VVDAAGQLMG ALHIHDLTRA KVI
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