| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0410 |
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| Symbol | |
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| ID | 1219214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 437978 |
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| End bp | 438553 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236768 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_518531 |
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| Protein GI | 17545129 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0160024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACA CCCGCCGCGC CAGCGGCCTT GCCCTCCTCG CCCTGAGCGC CGCGCTGTTG
CTGCCGGCCC TGCCCGCGCA CGCCGAGCGC GCCGACCGCG ACAAGCCGCT GGTGCTCGAA
GCCGACAACG CCAGCTACGA CGACCTGAAG CAGGTCTATC ACCTGTCCGG CAACGTGGTG
CTGACCAAGG GCACCATGGT GCTGCGCTCC GACACCGCCG ATCTGCGCAC GGACCCGGAG
GGCTACAACT ACGCCGTCGC CATCGCCAAG CCCGGCAACC TGGCCTTCAT CCGCCAGAAG
CGCGACAACG TCGATGAGTA CATCCAGGGC TGGGGCGAGC GCATCGAGTA CGACGGCAAG
CAGGAGATCT CCAAGCTGAT CAACCGTGCC CGCATGGAGC GCCTGCAGGG CGCCACGCAG
CTCGACGAGA TCCGCGGCGC GGTCATCACC TACGACGGCC AGAAGGAGTT CTACACGGCC
TCGGGCGGCG CGGAGAACGC AACCGCCGCC AACCCGTCCG GCCGCGTGCG TGCCGTGCTC
GCGCCGCGCA GCGGGACGCC GGCCGCCAAG CCCTGA
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| Protein sequence | MTDTRRASGL ALLALSAALL LPALPAHAER ADRDKPLVLE ADNASYDDLK QVYHLSGNVV
LTKGTMVLRS DTADLRTDPE GYNYAVAIAK PGNLAFIRQK RDNVDEYIQG WGERIEYDGK
QEISKLINRA RMERLQGATQ LDEIRGAVIT YDGQKEFYTA SGGAENATAA NPSGRVRAVL
APRSGTPAAK P
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