| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0300 |
|---|
| Symbol | |
|---|
| ID | 1219103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 332763 |
|---|
| End bp | 333635 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637236657 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_518421 |
|---|
| Protein GI | 17545019 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.9672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC CCACGCCGCC CGCCGACGCC GATCCGGACC TGGATCCCGA AGCCGACTCC
GCAGCGGACG CGCCCGCGCG CACGGGCATC CAGTCCATTG AAGTCGGCTT CCGCCTGCTC
GATGTGCTCG CGCGCAGCAA CGGCCCGATG ATGCTGCGCG ATCTCGCGCG CGCCGCGCCG
ATGAACCCGG CCAAGGCGCA CCGCTACCTG GTCAGCTTCG CGCGCCTGGG ACTGGTCGCG
CAGACGCCCG AGGGCCGCTA CGACCTCGGC CCCTTCGCCA GCGAAATGGG GCTGGTGAGC
CTGAACCGGC AGGACCCGAT GCGCCGCGCC CGCCCCGCCG CCGCCGCGCT GCGCGACGAG
ATCGACCACA CCATCGGCCT GGCCGTATGG GGCAACCAGG GGCCGGCCAT CGTCCACTGG
GAAGAGGCCA GCCAACCGAT CACCGTCAGC CTGCGCCTGG GCGACATCAT GCCCATGCTC
AACTCGGCCA CCGGCCGCGT GTTTGGCGCC TACCTGCCGC GCGCGCAGAC GCTGCCTTTC
ATCCAGCGCG AACTGGACGC GCTGGCCGCC GCCGGTGCCA CGGCGGGCAA CCCCGAGCAC
CCGCGCACGC TGCAAGCGTA CGATGCCCTC TGCGCCGAAG TGCGCGCGTG CGGCGTGTCG
CGCATCCATG GCGGCGTGCT GCCGGGCATC AATGCGATGT CCCTGCCGGT GTTCGACGCC
AACGGCCAGC TGTGCCTGGC GCTGCTCGCC CTGGGTGCCC AGAGCACATT CGATACCACG
GCCGACGGCC CGCTGGAGCG GCGCTTGCGG CAGGCCGTAC AACAGCTTTC CGCCGATCTT
GGATACGTTC CGCTCCACCA CCCGCAATCC TGA
|
|---|
| Protein sequence | MPRPTPPADA DPDLDPEADS AADAPARTGI QSIEVGFRLL DVLARSNGPM MLRDLARAAP
MNPAKAHRYL VSFARLGLVA QTPEGRYDLG PFASEMGLVS LNRQDPMRRA RPAAAALRDE
IDHTIGLAVW GNQGPAIVHW EEASQPITVS LRLGDIMPML NSATGRVFGA YLPRAQTLPF
IQRELDALAA AGATAGNPEH PRTLQAYDAL CAEVRACGVS RIHGGVLPGI NAMSLPVFDA
NGQLCLALLA LGAQSTFDTT ADGPLERRLR QAVQQLSADL GYVPLHHPQS
|
|---|
| |