| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0249 |
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| Symbol | |
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| ID | 1219052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 277167 |
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| End bp | 281666 |
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| Gene Length | 4500 bp |
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| Protein Length | 1499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637236606 |
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| Product | putative calcium binding hemolysin protein |
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| Protein accession | NP_518370 |
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| Protein GI | 17544968 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.74922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCA ACGACGCAAT GAATACGGTA CTTCCACCGC AAAATGGAAC ACCTCCCCAC
GTAACAGGAA ACTATGGGGA AAACAGACCC AGCGGACCAC ACGGCGGCAC TGATTTCAAC
TATCAGGGCG GCCAAACTGG AATCAACATG ACCAACCCTA CCATTTATTC ACCAATAAGT
GGCACGGTTA CCTACATTGG CGGCCAGTAC GGAACGATTA AGATCCGTGA TGCGCAAGGC
AATAGCCACG AGATCCTCCA TACCAATTCC CAAAGCGTCC AAGTTGGACA GCAGATAGAT
GCGGGAGCCC CCATCGGCAC AATGGGTGGA CGCGGACCAA ATGGTGCAAA TCAGTATGCC
CAGCATGTTC ATTATCAAAT GAAAGACCCT CAAGGTCTTC GCATCAATCC TCAAGATTGG
TGGGACGGCA ATGATGACGA GGGCGGCGAC GGCGTCGGTG GTGACGGCGT CGGTGGTGAC
GGCGACGGTA GTGGCGCTGC GGGTGGCACC GGTGAAGGTG GCGCCAATGC AGGTGCAGCC
GGCACAACGC CACCGCGACG AGATCCCCTT GTGCTCGATC TTGACGGCGA TGGCATCGAA
ACAACTAGTA CCCGGAACGG CGTCGTTATC CTGTTCGATC ACGACGGTGA TGGCGTTAAA
ACAGGCACTG GATGGGTCAT GCCAGATGAC GGCTGGCTGG TGCTGGATCG CAATGGCAAT
GGCGCCATCG ATTCTGGACA CGAACTCTTT GGCGTCGACA CGCTGAAAAG CAATGGCCAA
CTAGCCGCCG ACGGCTTCGA CGCATTACGT GATGTCGACG CGAACAAAGA TGGCAAAATT
GATGCATCCG ACAGCGTCTT TTTCAATCTT CGTATATGGC GCGACTTGAA CCAAGACGGT
ATCAGCCAGG CCAACGAACT CACGACACTT TCAGCCAACA ACATCGTTTC AATTGGCGTT
GACTCGACTA CTGTTCGCAC CGATTTAGGC AACGGTAACA TTCAAACTGC GGCAGGCACT
TTCACCCGTT CCAATGGCAC TAAGGGTGTA ACAGGTGAAA CCAACGGTGC AGCAGCCAAC
CTCGATTTGC TGGTTAATAC ATTCTACCGG CAATTTGTTG ATCACGTCCC GCTCACGGAT
CAAGCCAAGG CATTACCCAA CTTACGAGGC TCAGGTCGTG TCCGTGACCT TTCCGAAGCC
ATCAGTCTCT CTACCGATCT GGGTGACTGG GTACAGACTT ACGCTGAACA GACTGCACGG
CAGGCACAGA TCGACCGATT GGAGAACTTC ATAGAGAAGT GGGCCAACAC CGCCGATATG
AAGTCTCTTA AAGCGCAGGC GGATGCACTG GCCGCGAACG ACGTCAAACT GACCTACAAT
CTCACCGGAT TGACGGCGGG CACGGCTGCC TTCGATGATT TCGTGCGCAA GCTCGGTATT
GTGGAGCGCT TCATGGGTTT CACTTATGGA GGCGCAAATG GACAGGCCCG CTTCACACCA
CTGGATGCTT CTTCCGGAAA CTTCACGGTG ACATTGGCGG CCGAACAGAT TGCCAGTATA
TCCATGGCAT ACGAGAGATT TAAGGCTGAC ATCTATGAGT CTTTGTTACT GACAACTCGC
CTAAAATCTT TTGTGGATAC ACTGGAGAGT GATCTCTATT CCGATACGCT TAGCTTCTCA
GGGCTGGAAA GCCAGCTGGC CAAAAACGCG TCCGCCAATG GACTTGCGGG CATCATTGAT
CTGGTGGAAT TTATTAGCGC ATACGGTCAT CGCCGATTGG CAGAGCTAGG CTGGAATGCC
ACTGAATTCC TCATTACCCA ACTCAACAGG GCGCCTGATC TTGGCGCGTT TACCGAAGAG
TTGAGCAGCT GGACCGTCCG CCTTGCCGCC CCCACGGAGC ACAACCTCAC TGGCACCTCC
CGCCCTGATT TGTTGGTTGG CACCAATGCG GCTGATTACC TCTATGGCCG CGACGGGAAC
GATGTCCTCG TGGGTAAAGA AGGCAACGAC AACCTCTACG GTGGCGCCGG CAACGACACC
CTCGAGGGTG GCGCCGGCAA CGACTACCTC GTCGGCAACG AGGGCTCCGA CACCTACGTC
TTCAACTCCG GATGGGGCCA GGACACGATC TACAACTACG ACACCACCGC CGGGCGCTCC
GATGTCATCG AATTCGGCTC CGGCATCGCA GCCACCGATG TGATTGCGAC CCGCTCGGGA
GACGACCTGA TCCTCTCCCT GCGCAACGGC ACCGACAAGG TCACCGTCCA GTCCTACTTC
AACAGCGACG CCACCGGTCC CTATCGCATC GACCAGGTCC GCTTCGCCGA TGGCACCTCC
TGGGACGTCG CTGCCGTCAA AACCCTCGTC CAGGCGCCCA CCTCCGGTAC CGACAACCTC
TACGGCTACG CCTCCGACGA CACCCTCAAC GGCCTCGACG GCAACGACAC CCTGCGCGGC
TACGGCGGCA ACGATACCCT CCGCGGTGAC GCCGGCGCCG ACAACCTCTT CGGGGGCGAC
GGCAACGACA TGCTCGACGG CGGCGACGAC AACGACTACC TCTATGGCGA GGCCGGCGAC
GACAGCCTCC TGGGCGGCTC GGGCAACGAC AACCTGTACG GCGGCGCCGG CAATGACACC
CTCGAGGGCG GCGCCGGCAA CGACTACCTC GTCGGCAACG AGGGCTCCGA TACCTACGTC
TTCAACTCCG GCTGGGGGCA GGACACGATC TACAACTACG ACACCTCCAC CGGGCGCTCC
GATGTCATCG CCTTCGGTGA CGGCATCGCG GCTAGCGACA TCGTAGCTAC CCGTTCGGGC
GATGACCTGA TCCTTTCGCT GCGCAACAGC TCCGACAGGG TCACCGTCCA GTCCCATTTC
AATAGCGACG CCACCGGTCC CTACCGCATC GAGCAGGTCC GCTTCGCCGA CGGCACCTCC
TGGGACGTCG CCGCCGTCAA GGCCCTCGTC CAGGCGCCCA CCTCCGGTGC CGACAACCTC
TACGGCTACG CCTCCGACGA CACCCTCAAC GGCCTCGACG GCAACGACAC CCTGCGCGGC
TACGGCGGCA ACGATACCCT CCGCGGTGAC GCCGGTGCCG ATACCCTCTA TGGCGGCGAC
GGCAATGACT CCATCGACGG CGGCGCCGAC AACGACTACC TCTACGGCGA AGCCGGTGAC
GACCGCCTCC TGGGCGGCTC GGGCAACGAC ACCCTCTATG GCGGCAACGG TAACGACACC
CTCGAGGGCG ATGCCGGCAA CGACTACCTC GTCGGCAATG AAGGCTCCGA TACCTACGTC
TTCAACTCCG GCTGGGGGCA AGACACCCTC TACAACTACG ACACCAGCTC CGGGCGCTCC
GATGTCATTG AGTTCGGCAC TGGCATTGCA GCCAGCGACA TCGTGGCCAC CCGCAGTGGC
GACGATCTGA TCCTCTCCCT ACGCAACAGC TCCGACAAGG TCACCGTCCA GTCCTACTTC
TACAGCGACG CCACCGGCCC CTACCGCATC GACGAGGTCC GCTTCGCCGA CGGCACCTCC
TGGGACGTCG CCGCTGTCAA AACCCTCGTC CAGGCGCCCA CCTCCGGTGC CGACAACCTC
TACGGCTATG CCTCCGACGA CACCCTCAAC GGCCTCGACG GCAACGACAC CCTGCGCGGC
TACGGCGGCA ACGACACCCT GCGGGGTGAC GCGGGGGCCG ATACCCTCTA CGGCGGTGAC
GGCAACGACT CCATCGACGG CGGCGCCGAC AACGACTACC TCTACGGCGA AGCCGGTGAT
GACCACCTCC TAGGCGGCTC GGGCAACGAC ACCCTCTATG GCGGCAACGG CAACGACACC
CTCGAGGGCG GTGCCGGCAA CGACTACCTC GTCGGCAATG AAGGCTCCGA TACCTACGTC
TTCAACTCCG GCTGGGGGCA GGACACGATC TACAACTATG ACACCAGCTC CGGACGCTCA
GACGTCATCG CCTTCGGTGA CGGCATCGCG GCTAGCGACA TCATTGCTAC CCGTTCGGGC
GACGACCTGA TCCTCTCCCT CCGCAACAGT TCCGACAGGG TCACCGTCCA GTCCTACTTC
TACAGCGACG CCACCGGCCC CTACCGTACC GATCTGGTCC GCTTCGCCGA TGGCACCTCC
TGGGATGTCG CCGCCGTCAA GGCTCTCGTC CTGGTTCCCA CCTCCGGTGC CGACAACCTC
TACGGCTACG CCTCCGACGA CGCCCTCAAC GGCCTCGATG GCAACGACAC CATTCGGGGT
TACGGCGGCA ACGACACCCT CCGCGGTGAC GCGGGGGCCG ACAACCTCTT CGGTGGCGAC
GGCAACGACG TGCTCGACGG CGGCGCCGAC AACGATTACC TCTACGGCGA GGCCGGCGAC
GACTCCCTGC AAGGTGGTGC TGGCACCGAC ACTCTCTACG GTGGCAACGG CAACGACACC
CTCGAAGGTG TCAAACGCAG TCTCAAGTTG ATACAGATTC AGGTGCAAAC GCATTTGTAA
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| Protein sequence | MPFNDAMNTV LPPQNGTPPH VTGNYGENRP SGPHGGTDFN YQGGQTGINM TNPTIYSPIS
GTVTYIGGQY GTIKIRDAQG NSHEILHTNS QSVQVGQQID AGAPIGTMGG RGPNGANQYA
QHVHYQMKDP QGLRINPQDW WDGNDDEGGD GVGGDGVGGD GDGSGAAGGT GEGGANAGAA
GTTPPRRDPL VLDLDGDGIE TTSTRNGVVI LFDHDGDGVK TGTGWVMPDD GWLVLDRNGN
GAIDSGHELF GVDTLKSNGQ LAADGFDALR DVDANKDGKI DASDSVFFNL RIWRDLNQDG
ISQANELTTL SANNIVSIGV DSTTVRTDLG NGNIQTAAGT FTRSNGTKGV TGETNGAAAN
LDLLVNTFYR QFVDHVPLTD QAKALPNLRG SGRVRDLSEA ISLSTDLGDW VQTYAEQTAR
QAQIDRLENF IEKWANTADM KSLKAQADAL AANDVKLTYN LTGLTAGTAA FDDFVRKLGI
VERFMGFTYG GANGQARFTP LDASSGNFTV TLAAEQIASI SMAYERFKAD IYESLLLTTR
LKSFVDTLES DLYSDTLSFS GLESQLAKNA SANGLAGIID LVEFISAYGH RRLAELGWNA
TEFLITQLNR APDLGAFTEE LSSWTVRLAA PTEHNLTGTS RPDLLVGTNA ADYLYGRDGN
DVLVGKEGND NLYGGAGNDT LEGGAGNDYL VGNEGSDTYV FNSGWGQDTI YNYDTTAGRS
DVIEFGSGIA ATDVIATRSG DDLILSLRNG TDKVTVQSYF NSDATGPYRI DQVRFADGTS
WDVAAVKTLV QAPTSGTDNL YGYASDDTLN GLDGNDTLRG YGGNDTLRGD AGADNLFGGD
GNDMLDGGDD NDYLYGEAGD DSLLGGSGND NLYGGAGNDT LEGGAGNDYL VGNEGSDTYV
FNSGWGQDTI YNYDTSTGRS DVIAFGDGIA ASDIVATRSG DDLILSLRNS SDRVTVQSHF
NSDATGPYRI EQVRFADGTS WDVAAVKALV QAPTSGADNL YGYASDDTLN GLDGNDTLRG
YGGNDTLRGD AGADTLYGGD GNDSIDGGAD NDYLYGEAGD DRLLGGSGND TLYGGNGNDT
LEGDAGNDYL VGNEGSDTYV FNSGWGQDTL YNYDTSSGRS DVIEFGTGIA ASDIVATRSG
DDLILSLRNS SDKVTVQSYF YSDATGPYRI DEVRFADGTS WDVAAVKTLV QAPTSGADNL
YGYASDDTLN GLDGNDTLRG YGGNDTLRGD AGADTLYGGD GNDSIDGGAD NDYLYGEAGD
DHLLGGSGND TLYGGNGNDT LEGGAGNDYL VGNEGSDTYV FNSGWGQDTI YNYDTSSGRS
DVIAFGDGIA ASDIIATRSG DDLILSLRNS SDRVTVQSYF YSDATGPYRT DLVRFADGTS
WDVAAVKALV LVPTSGADNL YGYASDDALN GLDGNDTIRG YGGNDTLRGD AGADNLFGGD
GNDVLDGGAD NDYLYGEAGD DSLQGGAGTD TLYGGNGNDT LEGVKRSLKL IQIQVQTHL
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