Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0144 |
Symbol | |
ID | 1218947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 165575 |
End bp | 166540 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236501 |
Product | transcription regulator protein |
Protein accession | NP_518265 |
Protein GI | 17544863 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATA TCAGAACCCT GGACCTGAAC CTGCTCAAAG CGCTGGACGC GCTGCTGGAC GAGCGCAACG TCACGCGCGC AGCGGTCCGG CTGGCGATCA CGCAACCGGC GATGAGCGGC ATGCTGACGC GGCTGCGCGA CAGCTTCGAC GACCCGCTCT TCGTGCGCAC GCAGCGCGGC GTCGTGCCCA CCCAGCGTGC GCTGGAGCTG GCCGGACCGG TCAAGCAGGT GCTGGGCGAA GTCGATGCGC TGCTTCAGCC GCCGACCTTC GACCCGTCGA CGGCGAGCCT CACGCTGTCC GTGGCGGCCA CCGACTATGG GCTGCGGGCC GTGGTGGTGC CGTTCCTGCT GGCGCTCCGG CAGCGCGCCC CGCACGTCCG GCTGGCAGCG CGGCCGGTCA AGGATGCCCT GGTGCAGGCG CAGCTCGAAC GCGGCGAGCT CGACCTCGCC CTGCTGACGC CGGACAGCAC GCCGGCCGAC CTGTACGCCC GCCACCTGTT CGAAGAGCGC TACGTCTGCG CGCTGCGCCG GGACCATCCG GATGCGAGAG ACGGCCGCCT GTCGCTCGAC CGGTTCTGCG CCCTCGATCA TGCGCTGGTG TCGTACGTGG GGGGCGGTTT CGCGGGCGTG ACGGATGAAG CGCTGGCCAG GCTCGGCCGG ACGCGCCGGG TGACCTTGTC CGTGGGCAGT TTCCTGATCC TGCCCGAGAT CCTGCGCGCG AGCGACCTGG TCGCCGTGGT GCCGCGGCGG CTGGTTGCGC AGGTGGAGGG CCTGGCGCTG CTCGATCCGC CCATCGAGAT CCCGGGCTTT ACCAAGGTCG TCGCCTGGCA TGCGCGCACG CATCGGCATC CCGGCCACCG CTGGCTGCGC GCGCTGCTGT TCGAGACGTG CGGCACGCCG GATACGGCCC CCTCGCAAGT GCCCGCGGAA AGCGGATCGG ACCTCCACTT CCCTGCGGGT ACCTGA
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Protein sequence | MRDIRTLDLN LLKALDALLD ERNVTRAAVR LAITQPAMSG MLTRLRDSFD DPLFVRTQRG VVPTQRALEL AGPVKQVLGE VDALLQPPTF DPSTASLTLS VAATDYGLRA VVVPFLLALR QRAPHVRLAA RPVKDALVQA QLERGELDLA LLTPDSTPAD LYARHLFEER YVCALRRDHP DARDGRLSLD RFCALDHALV SYVGGGFAGV TDEALARLGR TRRVTLSVGS FLILPEILRA SDLVAVVPRR LVAQVEGLAL LDPPIEIPGF TKVVAWHART HRHPGHRWLR ALLFETCGTP DTAPSQVPAE SGSDLHFPAG T
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