Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0039 |
Symbol | |
ID | 1218841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 41881 |
End bp | 43227 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236395 |
Product | transmembrane sensor histidine kinase transcription regulator protein |
Protein accession | NP_518160 |
Protein GI | 17544758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCTA CCCTGCCGCT CGCCGCTCCA CCGCTCGACA CGTCCAGTCT ACGCCGCCTG TTCTGGCTGC GATGGAGCCT GCTGGCCACG CAGCTGATCC TGATGCTGCT GGCGCCGCTC ATCTTCGGCG TGCAGCTGCC GGTGGCGGTG CTGCTGAGCG TGATGGGCGT GCACGCGCTG TTCAACCTGC TGACCGGCTG GCAAGTGCGG CGCGACCGCC CGGTGCGGCA CATCGAGATC ACCGTCCAGC TGCTGGTGGA TCTGACCGCG CTGTCCGCGC TGCTGTATTT CACGGGCGGC GCGACCAACC CCTTCGTGTC GTTCTATCTG CCTGCGCTGG CGATCGCCGC GGCCATGCTG CCGATCGCGC ATGTGGTGGG GCTGACGCTG TACGCGCTGG CGGCCTACAG CGTGATGCTG GGCAACTACA TTCCGCTGGA TCTGCTGGAC CAGGCGGATG CGGTGCCTTA TCACCTCGCC GGCATGTGGA TCGACTTCGT CGCCAGCAGC GCCATGATCG CCGGGTTCAC CGCGCGGCTG TCGGCGGCGC TGCGCGAGCG CGAAGCCGAA CTCGCCGACG CGCGCGAGCG CCTGCTGCGC GAGCAGCGCA TCGAGGCGCT GGTGTCGCAG GGCGCCAGCG TGGCGCACGA GATGGGCACG CCGCTGTCCA CCGTGGCCGT CATCACCGGC GAGCTGCAGC ACGACGCCCG CCAGCCCGAT TCGCCGCTGG CGCCTTACCG CGAAGACCTG CGCGCCATCG AGCAGCAGCT GGAGCTGTGC CGCGCCGCGC TGGCGCGCCT GCAGCGCAAG CCGAACGACG GCACGCCCGA GCCGCTCGGC CTGTGGCTGC CGGCCTTCAC GCAGACGTGG CAGCTGCGCC ATCCGGACAT CCGCCTGCAC ACCGAGAGCT CGCCGGCTGC GCAGGCGGTG GAACTGGACG CGGTCGTTGT CGGCCAGATC CTCACCATCC TGCTCGACAA CGCGGCGCGC AGCCAGCAGC AGGCCGGGCG CGATCAGGTG CCGCTGCTGC TGACCGCCAG GATCGATGCC AACGCGGACA CCGTGCGCGA GGCGCCCCGG CAGATCGTGC TGTCGGTGGT CGATACCGGC CTGGGCGTGC CGGACGACCT GCGCACCGCG CTCGGCCGCA CGCCCGTGCC GAGCCGCCAC GGCGGCCATG GCATCGGCCT CTACCTGGCG GCGACCACGG CGCGCCGGCT GGGCGGCACC GTCGAGCTGC GTTCCAACCC GCCGCAGGGC GCGATCGCAG AACTGCGGCT GCCCGCGGCG GGTCCTAATG CACAACCGGC CGCACCCGCC ATCGGTGCGC CGACCCTGTT GACCTGA
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Protein sequence | MLSTLPLAAP PLDTSSLRRL FWLRWSLLAT QLILMLLAPL IFGVQLPVAV LLSVMGVHAL FNLLTGWQVR RDRPVRHIEI TVQLLVDLTA LSALLYFTGG ATNPFVSFYL PALAIAAAML PIAHVVGLTL YALAAYSVML GNYIPLDLLD QADAVPYHLA GMWIDFVASS AMIAGFTARL SAALREREAE LADARERLLR EQRIEALVSQ GASVAHEMGT PLSTVAVITG ELQHDARQPD SPLAPYREDL RAIEQQLELC RAALARLQRK PNDGTPEPLG LWLPAFTQTW QLRHPDIRLH TESSPAAQAV ELDAVVVGQI LTILLDNAAR SQQQAGRDQV PLLLTARIDA NADTVREAPR QIVLSVVDTG LGVPDDLRTA LGRTPVPSRH GGHGIGLYLA ATTARRLGGT VELRSNPPQG AIAELRLPAA GPNAQPAAPA IGAPTLLT
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