Gene RSc0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0013 
Symbol 
ID1218815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp14002 
End bp14895 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID637236369 
Producthypothetical protein 
Protein accessionNP_518134 
Protein GI17544732 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.822335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.137415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CCGCCTTCGA CCAGATGGTG TTCGCCGGCG GCGGCAATCG CTGCTGGTGG 
CAGGCCGGCT GGTGGGACAC CGTGCAGCCC GGGCTGGGCC TGCGGCCGCG CGTGATCGCC
GGCATCTCGG CGGGGGCGTC GACGGCCTGC ATGCTGCACG CATGGAATGC CGCGGACCTG
ATGGCGTACT ACGCCGAAGC CCTGCGCGAC AACACCCGCA ATGCCCACTG GGGCAACCTG
CTGCGCGGCG AGCGCGTGTT CCCGCACTAC GGCATGTACC GTGCGGCGCT GCTGACGGTG
TTCGGCGAGG GCCGCCTCGC GCGGCTCGGC CAGGCGCCCG AGATCCGCGT CGGCCTGGCG
CACATCCCGC GCTGGATGGG CGCGCGCACC GCGGTTGCGG CCGGGCTGAT CGCATACAAC
GTCGAGAAGC ACATTCGCAA GACGCTGCAC CCGACGCTGG GCCGGCGCCT GGGCTTCCGG
CCGGAATTCG TGCGTGCCCA GGACTGCGCC ACGCCGGATG CGCTGGCCGA CCTGCTGCTG
CAATCGGCCT CCACCCCGCC CTTCACCCCA GTGCTGCGGC GCGGCGGCCG GCCGGTGCTG
GACGGCGGCA TGGTGGACAA CGTTCCGGTG CAAGCACTCG ATCCCACGCC CGGTGACGTG
CTGGTGCTGG TCACGCGCCT GTACCCGCGG CCGACCTACT TCCGCATCGA CGCCCCGGTC
GAGGGTGGCG TGCAGCGCCG CTTTTACGTG CAGCCCTCGC GCAAGGTGCC GATTGCCAGC
TGGGACTACA CCAGGCCGGA GGCCATGCGC GACGCCTACC TGCTGGGCCG TCATGACGGC
GAAACCTTCC TGCGCGAACT TCCACGCGGG TTTGCCGCGC TGATCGCCGC TTAG
 
Protein sequence
MTLPAFDQMV FAGGGNRCWW QAGWWDTVQP GLGLRPRVIA GISAGASTAC MLHAWNAADL 
MAYYAEALRD NTRNAHWGNL LRGERVFPHY GMYRAALLTV FGEGRLARLG QAPEIRVGLA
HIPRWMGART AVAAGLIAYN VEKHIRKTLH PTLGRRLGFR PEFVRAQDCA TPDALADLLL
QSASTPPFTP VLRRGGRPVL DGGMVDNVPV QALDPTPGDV LVLVTRLYPR PTYFRIDAPV
EGGVQRRFYV QPSRKVPIAS WDYTRPEAMR DAYLLGRHDG ETFLRELPRG FAALIAA