Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0013 |
Symbol | |
ID | 1218815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 14002 |
End bp | 14895 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236369 |
Product | hypothetical protein |
Protein accession | NP_518134 |
Protein GI | 17544732 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.822335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.137415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CCGCCTTCGA CCAGATGGTG TTCGCCGGCG GCGGCAATCG CTGCTGGTGG CAGGCCGGCT GGTGGGACAC CGTGCAGCCC GGGCTGGGCC TGCGGCCGCG CGTGATCGCC GGCATCTCGG CGGGGGCGTC GACGGCCTGC ATGCTGCACG CATGGAATGC CGCGGACCTG ATGGCGTACT ACGCCGAAGC CCTGCGCGAC AACACCCGCA ATGCCCACTG GGGCAACCTG CTGCGCGGCG AGCGCGTGTT CCCGCACTAC GGCATGTACC GTGCGGCGCT GCTGACGGTG TTCGGCGAGG GCCGCCTCGC GCGGCTCGGC CAGGCGCCCG AGATCCGCGT CGGCCTGGCG CACATCCCGC GCTGGATGGG CGCGCGCACC GCGGTTGCGG CCGGGCTGAT CGCATACAAC GTCGAGAAGC ACATTCGCAA GACGCTGCAC CCGACGCTGG GCCGGCGCCT GGGCTTCCGG CCGGAATTCG TGCGTGCCCA GGACTGCGCC ACGCCGGATG CGCTGGCCGA CCTGCTGCTG CAATCGGCCT CCACCCCGCC CTTCACCCCA GTGCTGCGGC GCGGCGGCCG GCCGGTGCTG GACGGCGGCA TGGTGGACAA CGTTCCGGTG CAAGCACTCG ATCCCACGCC CGGTGACGTG CTGGTGCTGG TCACGCGCCT GTACCCGCGG CCGACCTACT TCCGCATCGA CGCCCCGGTC GAGGGTGGCG TGCAGCGCCG CTTTTACGTG CAGCCCTCGC GCAAGGTGCC GATTGCCAGC TGGGACTACA CCAGGCCGGA GGCCATGCGC GACGCCTACC TGCTGGGCCG TCATGACGGC GAAACCTTCC TGCGCGAACT TCCACGCGGG TTTGCCGCGC TGATCGCCGC TTAG
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Protein sequence | MTLPAFDQMV FAGGGNRCWW QAGWWDTVQP GLGLRPRVIA GISAGASTAC MLHAWNAADL MAYYAEALRD NTRNAHWGNL LRGERVFPHY GMYRAALLTV FGEGRLARLG QAPEIRVGLA HIPRWMGART AVAAGLIAYN VEKHIRKTLH PTLGRRLGFR PEFVRAQDCA TPDALADLLL QSASTPPFTP VLRRGGRPVL DGGMVDNVPV QALDPTPGDV LVLVTRLYPR PTYFRIDAPV EGGVQRRFYV QPSRKVPIAS WDYTRPEAMR DAYLLGRHDG ETFLRELPRG FAALIAA
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