| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4232 |
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| Symbol | trbC |
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| ID | 3712007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007490 |
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| Strand | + |
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| Start bp | 76089 |
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| End bp | 76841 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640069550 |
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| Product | TrbC, sex pilus assembly and mating pair formation protein |
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| Protein accession | YP_345417 |
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| Protein GI | 77404845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCATC TGGCGCAAAC GCAACTGCTG CGCGCTCTGA TCGCGGCCGC CGTCCTGTCG
GCAGGCACCG CCAGCGCCGG GGACGAGCTG CCCGATCCTG CCTTCGCGCC GGGAGCCACC
GGTCGGATTG CGGCGCCGGT CGACCGGATC GTTCGCGATG CGGAACGCCG CGGCGAGGCG
CTGGCCCGCG AGCTCACGAT CCAGCCGCCG CGCGAGGGTG TAGAGATCGA GGATCTGGCC
GGGATCCGCA CCCGGGCGCT GAACGATCCG CGCGTGCGCG CCCTCCTCGG AGCCCCCGAT
GCGGAGGAGG TCGCGGCCGA AACCCGCGCC CGCTACGGCG AGGCGCGCGC GATCCTCTTT
GCCTCCTTCT CGATGCCCGA CACTTCGCTC CGGCAGATGA TGCGGGAGGC AACCGCTCAC
GATCTGACGG TGGTGTTTCG GGGCTTCGTC AACAACAGCG TCTTCGACAC GCGGGCGAGG
CTCGAGGAAG TCTTTGCGGA GGACGAGACA GGCGAGGCCT TCGGGATCGA CCCGACGCTC
TTCCGGCGCT TCGACATTCG CTCGGTGCCG GCCCTCGTGG TGCTGGCCGA GGATCTCGGC
GACTGCGCAA CGCCCGCCTG CGAGGGCGAT CCGCCGCCCC GGCATGATCG GGTGAGCGGC
AACGTGCCCC TTGAGACCGC GCTGCGCGTG ATCGCGGCCG GCAATGGCGA GGCCGCTTCG
GTGGCCCGCT CGCTTCTGGA GCAAAAGCCA TGA
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| Protein sequence | MAHLAQTQLL RALIAAAVLS AGTASAGDEL PDPAFAPGAT GRIAAPVDRI VRDAERRGEA
LARELTIQPP REGVEIEDLA GIRTRALNDP RVRALLGAPD AEEVAAETRA RYGEARAILF
ASFSMPDTSL RQMMREATAH DLTVVFRGFV NNSVFDTRAR LEEVFAEDET GEAFGIDPTL
FRRFDIRSVP ALVVLAEDLG DCATPACEGD PPPRHDRVSG NVPLETALRV IAAGNGEAAS
VARSLLEQKP
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