Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4159 |
Symbol | |
ID | 3711877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007490 |
Strand | + |
Start bp | 18722 |
End bp | 19732 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640069497 |
Product | isopropylmalate/homocitrate synthase |
Protein accession | YP_345364 |
Protein GI | 77404792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAA AACGAACCCT CATCAACGAC GCAACGCTGC GCGAAGGGAA TCAGGCTTCG GGCGTAAGGT TCAGCGTACA CGACAGCGTA GCCATTGCCA CCGCGCTTGA CGGGATCGGC GTCGACATGA TCGAGATCGG TCACCCGCTC GCCGGACCAT ACGAGCACCA GCGCACCGAG GCCGTTGCGA AGCTCGGGCT CGGCGCAAAG ATCATTGCGC ACGCCCGTGC ACATCGCACC GATATTGAGG CCGTCAGCCG TACCGGGGCC ACTTGGGTCG GGATCTTCCT GGGTGTCAAC GACATCACGA CGAAGGCCCG GGTGATCGGT CGCAGCACCA CGGAACTGAT CCGAATGGTC GCCGACGCGG TGAAGGTCGC CAAGGATTGC GGCTTGAACA TCCGCTACAG TTGCGAAGAT GCTAGCCGCA CCAACACACT GTTCCTAGTG GACGTGTTCG GCGCGGCGAT CGACGCAGGC GCCGACCGCA TTTGCTACGC CGATACGCTC GGAATCGCCG AGCCTGCCGA AGTTGCGCGC AAGGTCACCC TGATGAAGTC CGAATTCCCC GATGCGGAGG TGGAGGTGCA TCTGCACGAC GACCGCGGCC TCGCCATGGC CAACTCGCTC GCCGCGATCG ACGCCGGTGT CGACTCTATA TCCGTCTCGG TGAATGCGTT GGGCGAGCGC TGCGGCATCA CGGACCTAGC GACCTTACTC GTCAATCTTG GATTTCGAGG CGAGCGCGCA CTGCCCGACA TCTCGGAGCT TCGAGCACTG TCACGATTGG TCGCCATGTC ATCGAATACG CCCTTCGACG CGCTGCGGCC GATCGTCGGC GACAACGCGT TCAAGCATGG ATCAAAACTT CACCAACGCG CCACGCAGTA CGAGCCGCGT GCCTACGACT GGATCAAGGA GTTCATCTAC AGACATGATC AGCAGGCCGT TGGGCAGGCA CCTGGCGAGG AACCGTCGGC TCCCGACCAA ACGGTCAGCG AAATTTCGTA G
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Protein sequence | MQRKRTLIND ATLREGNQAS GVRFSVHDSV AIATALDGIG VDMIEIGHPL AGPYEHQRTE AVAKLGLGAK IIAHARAHRT DIEAVSRTGA TWVGIFLGVN DITTKARVIG RSTTELIRMV ADAVKVAKDC GLNIRYSCED ASRTNTLFLV DVFGAAIDAG ADRICYADTL GIAEPAEVAR KVTLMKSEFP DAEVEVHLHD DRGLAMANSL AAIDAGVDSI SVSVNALGER CGITDLATLL VNLGFRGERA LPDISELRAL SRLVAMSSNT PFDALRPIVG DNAFKHGSKL HQRATQYEPR AYDWIKEFIY RHDQQAVGQA PGEEPSAPDQ TVSEIS
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