| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3917 |
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| Symbol | rkpT1 |
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| ID | 4796469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009007 |
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| Strand | - |
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| Start bp | 112923 |
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| End bp | 113723 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640103037 |
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| Product | ABC polysaccharide export transporter, inner membrane subunit |
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| Protein accession | YP_001033886 |
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| Protein GI | 125654692 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0712312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGGGC TCTCGGGTCT TCTTGCAGGG CGGCGCTTCC TCTGGGGCCG GTCGGTCCTC
TCGCTCATGC TGCGCGAGAT GGCCACGAGC TACGGCCGCT CTCCGGGCGG CTATCTCTGG
GCGGTGGCCG AGCCGGTGGC GGCGCTGACG CTGCTGACGG TGGTCTTCTC CTTCCTGATG
CGCTCGCCGC CCTTGGGCAA CAACTTCCCG CTCTTCTATG CCACGGGCTA TCTGCCCTTC
ATGTATTACA CCGCGCTCAC CGCGAAGATC GGCCAGGCGA TCCGCTTCTC GCGCCCGCTT
CTCGCCTATC CGGCGGTGAG CTTCTTCGAT GCGATCCTGA GCCGGTTCCT GCTCAACACG
CTGACGAACC TCGTGGTCTT CGTGATCGTG ATGGTGGGCA TCATCGCCTT CTACGATCTG
AACGTGAGCC TCGATCTGCC CGCGATCCTC GAGGCCTTCA GCATGGCGGC GGCGCTGGCG
ATGGGCGTGG GCACGCTCAA CTGCTATCTC TTCAGCGTGG CGCCGGTCTG GGAACGGGTC
TGGGCCATCC TCAACCGGCC GATGTTCCTG CTGTCGGGGA TCTTCTTCCT GATGGAGACC
GTGCCCGAGC CCTTCCGCAC GCTTCTGTCC TACAATCCGC TCACCCATGT GATCGCGAAG
ATGCGTCAGG GCTTCTTCGC GACCTACGAC GCCCGGCTGG TCGACCCGCT CTATGCCTAT
TCCGTAAGCC TTGTCTGTCT CTTCTTCGGC ATGCTGTTGC TGAACCGTCA TCACCGGATG
CTTCTGAATG AAGGTGCCTG A
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| Protein sequence | MTGLSGLLAG RRFLWGRSVL SLMLREMATS YGRSPGGYLW AVAEPVAALT LLTVVFSFLM
RSPPLGNNFP LFYATGYLPF MYYTALTAKI GQAIRFSRPL LAYPAVSFFD AILSRFLLNT
LTNLVVFVIV MVGIIAFYDL NVSLDLPAIL EAFSMAAALA MGVGTLNCYL FSVAPVWERV
WAILNRPMFL LSGIFFLMET VPEPFRTLLS YNPLTHVIAK MRQGFFATYD ARLVDPLYAY
SVSLVCLFFG MLLLNRHHRM LLNEGA
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