| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3368 |
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| Symbol | |
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| ID | 3722069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 431269 |
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| End bp | 432588 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640073034 |
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| Product | periplasmic sensor diguanylate cyclase |
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| Protein accession | YP_354872 |
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| Protein GI | 77465369 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.778826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGG CACGGCGCAT TCTCTATCGG CAATCGCTCC GCGGCTGGAT GGCGCTGGCG
CTGGTCCTCG CCGTCCTGCC GCTTCTGACC AGCGCCGTGG TGGGCTACGC CGTCTATCAC
CGCACCATCG TCAGCCCGTT CCGCGACGTG CTGACGGTTC AGCATGCGAC GCTCGTCAGC
CTCGAACGCA TCCACGACGA TTACTGGCAG GTGGCCGAAG CGGTGAACGG CTATCTGCTC
AGCGGCGATA CCGAGCGCGC CGTCCGCTAT GCCGCCGTGG CAGCCGAGGT CGAGGCGCAG
TTCGAAAGGC TCTCGGAGGC CGTGGCGGCC GATCCGGCGC TGGTCGCGCT CATCGGGGTA
GCGCGGGCGG AATGGAGTGC GCTCGCGCGC GATGCTGAGA CCGTGCTCGC CCGTCCGCGG
GAGGGGCTGG CCGGGGCGGT GCCCGACATC GACCGGGTCG CGGCACTCGA ACGCGAGCTG
CCGGTGGCGG CGCAGAGGCT CGAGCAGATC GTCGAGCGGC TGCGGAGCGA GAGCGAGGCG
CATCACGCGG CGGCGCTGGT GGCGCTCCGG CGGCTGGAGA TCGGGGCGGC TGCGGCCCTC
ATCCTGTCCG TCCTGATGAT GGGGCTCGGC GCCTGGGTGG TGAACCGGGC GATCGTCCTC
GGGACCGACC GGCTGGTCGA GGGCGCGCGG CGCGTGGCCT CGGGGCAGCG CGAAGAGCCG
GTGGCGGTGA CGGTGCCCCC GGAGCTCGCT GCCGTGGCCA ATGCCTTCAA CGACATGACC
CGCACCATCG TCGAGCAGGA GGCGCGGCTG CGCGAGTTCG GGCGGAGGGA CGCGCTGACC
TCGCTTCTCA ATCGCCGCGA GTTCGACCAC GCGCTGGAGC AGCGCGCGGC GCCCTGGACG
GGCGAGCCCT ATGCGCTGCT GCTGATCGAC ATCGACCGGT TCAAGCGGAT CAACGACACC
CACGGCCATG CGGTGGGCGA TGCCGTGCTG CGGGCGGTGG CCCTGCGGCT GGCCGCGTCC
GCGCGCCAGG GTTTGCCCCT CTTCCGGTAC GGCGGCGAGG AATTCGCCCT GCTCCTCGAC
CGGGCCGGGG CGGCCGAGGC CCTGTCCGAG GCCGAGGATC TGCGCCGCGC GGTGGCGGAG
GAGCCGGTCG GGCTGGAGGA CGGCACGCGG ATCGCCGTCA CGATCAGCGT GGGCATCGCG
CTCGGCGCCC GCGGTCAGGC CGGCGCGGAG CTGTTCGCGG CCGCCGACCG CGCACTCTAT
GCGGCGAAGG ACGCGGGGCG CAATTGCAGC CGGATGGATC CCTCTGTTGT GCAGGCCTGA
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| Protein sequence | MDWARRILYR QSLRGWMALA LVLAVLPLLT SAVVGYAVYH RTIVSPFRDV LTVQHATLVS
LERIHDDYWQ VAEAVNGYLL SGDTERAVRY AAVAAEVEAQ FERLSEAVAA DPALVALIGV
ARAEWSALAR DAETVLARPR EGLAGAVPDI DRVAALEREL PVAAQRLEQI VERLRSESEA
HHAAALVALR RLEIGAAAAL ILSVLMMGLG AWVVNRAIVL GTDRLVEGAR RVASGQREEP
VAVTVPPELA AVANAFNDMT RTIVEQEARL REFGRRDALT SLLNRREFDH ALEQRAAPWT
GEPYALLLID IDRFKRINDT HGHAVGDAVL RAVALRLAAS ARQGLPLFRY GGEEFALLLD
RAGAAEALSE AEDLRRAVAE EPVGLEDGTR IAVTISVGIA LGARGQAGAE LFAAADRALY
AAKDAGRNCS RMDPSVVQA
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