Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3332 |
Symbol | |
ID | 3722033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | - |
Start bp | 396882 |
End bp | 397598 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640072998 |
Product | putative transmembrane protein |
Protein accession | YP_354837 |
Protein GI | 77465334 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGACG TCACCGAGAT CTGGAGCTAT CTGGCCCACG GCCCGCTCCT CTGGCTCGCC CTGACCCTCG CGGCCTTCGT TGCGGGCAGT TTCCTCTTCG AGCGGGCGGG CCGCCGGGCC TGGGCCAATC CGGTGCTGAT CGCGGTGGCG CTGGTGGCGG CGGCGCTGGA ACTCACCGGC ACCAGCTACG CCACCTATTT CGAGGGCGCG CAGTTCGTGC ATTTCATGCT GGGGCCGGTG ACGGTGGCGC TGGCCACGCC TCTCTGGGAC AATCGCGCCG CGGTGCGCCG GTCGCTCCTG CCGATGGCGG CGGCGCTTGC GGCGGGTCTC ACCGCGGCGC TCGGCAGCGT CGTGCTGATC GGCCGGGCCA TGGGCCTGCC CGCGGGCACC ATCCTGTCGA TGCTGCCCAA GTCGGCCACC GCGCCGGTGG CCATCGGCGT CTCGGAAGGG ATCGGCGGCT CGCCCACCCT GACGGCGGTG CTCGTGATCC TGACCGGCAT CGTGGGCGCG GTGCTGGCGC CGCCGCTGCT GGCGCTCCTG CGCATCCGCG ACCCGCGGGC CCGCGGCTTC GCTGTGGGCC TTGCCGCCCA CGGGATCGGC ACGGCGCAGA TGATGCTGAC GGACGCGCGG GCGGGGGCCT TCGCCGGGAT CGGACTCGGC GTCGGAGCGG TGACCACAGC CCTCGTGGCG CCCCTCGTGG CCCACTGGCT GTTCTGA
|
Protein sequence | MRDVTEIWSY LAHGPLLWLA LTLAAFVAGS FLFERAGRRA WANPVLIAVA LVAAALELTG TSYATYFEGA QFVHFMLGPV TVALATPLWD NRAAVRRSLL PMAAALAAGL TAALGSVVLI GRAMGLPAGT ILSMLPKSAT APVAIGVSEG IGGSPTLTAV LVILTGIVGA VLAPPLLALL RIRDPRARGF AVGLAAHGIG TAQMMLTDAR AGAFAGIGLG VGAVTTALVA PLVAHWLF
|
| |