Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3299 |
Symbol | |
ID | 3722001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 360413 |
End bp | 361459 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640072968 |
Product | TRAP-T family transporter periplasmic binding component |
Protein accession | YP_354808 |
Protein GI | 77465305 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.783922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCGTTA TCAGACTGAT CGCGATTGCC CTGTTGCTCG TGGGCCTTCC GTCCCGGCTT CCCGCTCTGG AGGTCAACAT GCTTACGGGA GGTCCGACCG GAACCTACAT CCAGATCGGC CGCGACATCG CGAAGGCCGC CTCGGCCTGC GGCATCGAGA TGACCGTGCA TGAAAGCGCG GGCTCGCTCG AGAATTTCCT CGGCGTCCGT CAGCGCCCGC GCACACAGTT CGGCATCGTC CAGTCGGATG TGCTCGAATA TCTCAAGACC TTCGCCGCCG ACGATCCCGA GGTGAGCCGC GCGATCTTCG GCGTCCGCAT CGCCTTTCCG CTCTACGACG AGGAGGTGCA TCTTCTGGCG CGGAGGGAGA TCGGCAGCCT GAAGGACCTC GACGGCAAGC GCGTCTCGAT CGGGGTGGAG AATTCCGGCA CCTTCCTCAC CGCCTCGCTC GTCCTCGACC TTGCAGAGGT CGCGCCCGGC GAGCGCAGGA TGATGAACCA GGACGACTCG CTCAAGGCGC TGCTGGCCGG AGACATCGAC GCCTTCTTCT ATGTGGCCGG TGCGCCTGCA AAAATCTTCG CCTCGCCCGA GATCGACGGC GAGCGGTTCC ATCTGGTGCC GGTGGCCGAA GAAGTGCTGC GGCAGGTCTA CAAGCCCACC CAGATCCCCG CCGGCAGCTA TCCGTTCCAG ACAGGGCCGG TCGATGCCAT CGCGGTCAAG GCCGTGCTGA TGACCTACGG CTACGATCCC AAGCGCAACG CCTATCACCG CGAAAGCTGC AAGGCGGTGT CGGACATCGC CCATGTGGTG AGCACCCATT TCCCCGAGCT CCAGCAATCG GGCCATCCCA AATGGAAGCA GGTGAACCTG ACCGATCTGC CGGCGGGCTG GGACATCGGC GAATGCGTCA ATGCGGGTCT GGAACCCGGC TATCGGCTTC CCTGCGATCC GCCCGAGCCC GCGGTGGCCG CCCCTGCCGA CGCCTCGGCC GAGAGCGAGG CGAACCGGGC CTACCGGCGG CAGATCTGCG CCGTGGTGGG CTGCTGA
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Protein sequence | MPVIRLIAIA LLLVGLPSRL PALEVNMLTG GPTGTYIQIG RDIAKAASAC GIEMTVHESA GSLENFLGVR QRPRTQFGIV QSDVLEYLKT FAADDPEVSR AIFGVRIAFP LYDEEVHLLA RREIGSLKDL DGKRVSIGVE NSGTFLTASL VLDLAEVAPG ERRMMNQDDS LKALLAGDID AFFYVAGAPA KIFASPEIDG ERFHLVPVAE EVLRQVYKPT QIPAGSYPFQ TGPVDAIAVK AVLMTYGYDP KRNAYHRESC KAVSDIAHVV STHFPELQQS GHPKWKQVNL TDLPAGWDIG ECVNAGLEPG YRLPCDPPEP AVAAPADASA ESEANRAYRR QICAVVGC
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