| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3030 |
|---|
| Symbol | |
|---|
| ID | 3721615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 62785 |
|---|
| End bp | 63729 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640072705 |
|---|
| Product | ABC peptide/opine transporter, inner membrane subunit |
|---|
| Protein accession | YP_354546 |
|---|
| Protein GI | 77465043 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGCT ACCTGTTCAG GCGATTCCTG CTGGCGATGC TGGTTCTGGC CGTCGCGCTG
CTGATCCTGT TTTGTCTGGT CTATGCGGTG CCGGGCGATC CGGCGACCGT TGCCCTCGGC
CCGCGGGCCA CCGAGGCCCA GAAGATCGCC TTCCGCGAGA GGATGGGGCT CGATGACCCG
ATCGTGGTGC AGGCCATCAC CTACCTTGGA CTGCTGCTGC GCGGCGACAT GGGGGTCGAC
CTGCTCAGCC AGCGGCCGGT GGCCGATCTG GTGCTGGCCG CGCTGCCGCG CACAGTGCTG
CTGGCGGTGG TGGGACTGGG CTGGGCGGTG GCCCTCGGCC TGCCGCTGGG CGTCGTCTCG
GCCCTGCGGC CCAATACGCT GATCGACCGC ATCGTTGGCG TGATCTCGAC CAGTGTCGTG
GCCCTGCCGG CCTTTCTCAT GGCGATCTAT GCGCTGATGC TGTTCTCGGT GACGCTGGGC
TGGTTTCCCG CCATCGGCGC CGGAGAGCCC GGCCATTACG CAAGCCAGGC GCGGCACCTC
GTCCTGCCGG CGCTCGCGGT CGGCATTGCC TGGGTCGGCT ATATCGCCCG GCTGGTGCGG
GTCTCGATGC TGGAGGTTCT GGCCGAGAAC CACGTCCGGA CCTATCGCGC CTTCGGGGTC
TCGGACCTGC GGATTGCGAT GCGCTTCGCG CTGCCCATCG CCGTCGCGCC GGTGCTGTCG
GTGATCGGCG TCGGGATGGG CAATCTGCTG TCGGGTGCCG TGCTGGTCGA GGTGGTCTTC
GCCCGGCCCG GCCTCGGCGC GCTGGCCTAT GACGCGGTGA TCAGCCGCAA TTTTCCCGTT
CTCTTCGGCT CGGTCGTCGT GACCACCGCG CTCTATGTCA CCGCCAATTT CCTCGCCGAT
GCGGCGATCG CCGCGCTCGA TCCGCGCGTG GCCAAGGAGA GCTGA
|
|---|
| Protein sequence | MASYLFRRFL LAMLVLAVAL LILFCLVYAV PGDPATVALG PRATEAQKIA FRERMGLDDP
IVVQAITYLG LLLRGDMGVD LLSQRPVADL VLAALPRTVL LAVVGLGWAV ALGLPLGVVS
ALRPNTLIDR IVGVISTSVV ALPAFLMAIY ALMLFSVTLG WFPAIGAGEP GHYASQARHL
VLPALAVGIA WVGYIARLVR VSMLEVLAEN HVRTYRAFGV SDLRIAMRFA LPIAVAPVLS
VIGVGMGNLL SGAVLVEVVF ARPGLGALAY DAVISRNFPV LFGSVVVTTA LYVTANFLAD
AAIAALDPRV AKES
|
|---|
| |