Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_2539 |
Symbol | |
ID | 3720173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | + |
Start bp | 1182882 |
End bp | 1184018 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640070717 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_352598 |
Protein GI | 77463094 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.256647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCAG AACCTGCCCC GAGCGAACCA AGCGGATCAA GCGTGCCCCA ATCCCCTGCC AATCCTCCAC GCCTGAAGGT CGAGCATCTG ACGCGCGCCT TCGGGGGCAC ACCTGTCGTC GATGACGTGT CGCTCGATGT GGCGGCGGGG CAGGTGGCCT GCCTCCTCGG CCCCTCGGGC TGCGGCAAAT CCACGACGCT GCGCATGATC GCGGGGGTGG AGCGCCCCGA CCGGGGGCGC ATCGCCTTCG ACGGCCAGCC GGTCTCGGAC GAACGCCTGT TCCAGCCGCC CGAGGCGCGG TCGGTGGGGC TCATGTTCCA GGATTTCGCG CTGTTTCCGC ATCTGACCGT CGCGCAGAAC GTGGCCTTCG GGCTGCGGAG CGGGCGCGAC GAGCGCGACC GCCGGGTGGC CGAACTGCTC GAGCGGGTCA ATCTGGTGGG CTACGGGACG AAACATCCCC ACCAGCTGTC GGGCGGCGAG CAGCAGCGGG TGGCGCTGGC GCGGGCGCTC GCGCCGCGGC CGCGGGTCAT GCTGATGGAC GAGCCCTTCT CGGGGCTGGA CAACCGGCTC CGCGACGGGA TCCGCGACAC GACGCTCGAG ATCCTGAAGG AGGAAGGGGC GGCGGTGCTC CTTGTCACGC ACGAGCCCGA CGAGGCGCTG CGGATGGCCG ACGAGATCCT TCTCATGCGC GCCGGGCGGA TCGTGCAGCG TGGCTCGCCC TACAACATCT ACAATGCGCC GGCCGACCGT GCAGCGGCCG CCTTCTTCTC GGATATCAAC GTGATCCGCG GCACCTCGCG GGGGGCGCTG ACCCGGACGC CCTTCGGCGA ATTCCTTACC CCCGGTCATG CCGACGGGGC CGAGGTCGAG ATCGTGATCC GTCCGCAGCA TCTGAAGATC GACTTCGACC GCAACGGACG CGGGCCGAAC CCCACGCCCG CCGAGGGCAC GCCCGCCCGC GGGCGGGTGG TGCGCGCGCG GTTTCTCGGC CGCGAGAGCC TCGTCGAATT CGTCATGGAC AGCGACGGAT CGCGGCTGAC GGCCTCGGTG CCGAACGTCT TCCTGCCGAA ACCCGGCACC GCCCTCTGGC TGATGATCCG CCGCGACCGC TGCTTCGTCT TTCCCGCCCG CCGCTGA
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Protein sequence | MPPEPAPSEP SGSSVPQSPA NPPRLKVEHL TRAFGGTPVV DDVSLDVAAG QVACLLGPSG CGKSTTLRMI AGVERPDRGR IAFDGQPVSD ERLFQPPEAR SVGLMFQDFA LFPHLTVAQN VAFGLRSGRD ERDRRVAELL ERVNLVGYGT KHPHQLSGGE QQRVALARAL APRPRVMLMD EPFSGLDNRL RDGIRDTTLE ILKEEGAAVL LVTHEPDEAL RMADEILLMR AGRIVQRGSP YNIYNAPADR AAAAFFSDIN VIRGTSRGAL TRTPFGEFLT PGHADGAEVE IVIRPQHLKI DFDRNGRGPN PTPAEGTPAR GRVVRARFLG RESLVEFVMD SDGSRLTASV PNVFLPKPGT ALWLMIRRDR CFVFPARR
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