| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_1182 |
|---|
| Symbol | |
|---|
| ID | 3718846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007493 |
|---|
| Strand | + |
|---|
| Start bp | 2951271 |
|---|
| End bp | 2953094 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640072413 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_354267 |
|---|
| Protein GI | 77464763 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTCT CCAGCTACCG ATCGCCGAGC CTGCGGGCCG CCCTCGTCCT GCTCGCCATC
GCCGCGGCGG CCCCTCAGGC TCGGGCGCTC GACCGGCTCG AGTTCCGCGT GGCCGGCAGC
ACCGACGAGG TCGAAGAGGT GATCAAGGGC GCCTCCGCCC TGATCGCGGC ACGCGCGGCC
GAAGACAGCG AGACGCAGGA CATCTTCTCG GCCGCCCGGT CGGAATACGG TCGGCTGGTG
ACGGCCCTCT ACGGCCTTGG CTACTATTCT CCCGTGGTGA GCGTGCTTGT GGACGGGCGC
GAGGCGGCGC AGATCCCGCC GCTCGACGCC CCCGAGACCA TCGGCACCAT CATCGTGCAG
GTGCAGGTCG GCCCGCCCTT CCGGTTCGGC GCGGCGCGGG TGGCTCCGCT CGCCCCCGAG
ACGGAGATGC CAGAAGGCTT CCGCACCGGC GAGCGCGCGC GCAGCACGCT GGTGCAGGAC
GCGGTAAGTG CTGCAGCGGA CGGCTGGCGC TCGGCGGGCT TCGCGAAGGT CGATGTGGGA
TCGCAGACGG TGGTGGCCGA TCATGCCCGG CGCACGCTCG ATGCCGATGT CCGCATGGCG
CCCGGGCCCC GGCTCCGCTT CGGGGACCTG CGCATCAACG GCGAACAGCG CATGAGCGAG
CGCCGCATCC GCAAGATCGC CAATCTGCCC ACCGGCGAGA CCTACGACCC CGAGGAACTG
GCGGACAGCG CCGACCGCCT GCGCCGGACG GGCGTCTTCC GCTCGGTCTC GCTGACCGAG
GACGAGACGG TGACAGCGCC CGACCTGCTC GGCATCACCG CCACCGTCGT CGAGGAACTG
CCGCGCCGCT ACAGCTTCGG CGTCGAGGTC TCGAGCCTCG AAGGCGCCAC CATCTCGGGC
CAGTGGATCC ACCGCAACCT TCTGGGCGGT GGCGAGCGGC TGACCGTGAC GGGCGAGGTG
GACAATCTCG GCGCCTCGAA CAGCGGCGTG GACTACCGCC TCGGGGTGAC GCTCGACCGC
CCCGCCACCC CCACCGCCGA CACGACCCTC GGTTTCGGGG TGCTGGTGGA GCGGCTGGAC
GAGGAGGATT ACCTCGCAGA TACCGTGTCG CTCTCGACGA CGCTGACCCG GCTCTTCAGC
AAGCGCCTCA CCGGCAGCCT CGGGGTCGGC TATACCTACT CGGACGTCGA GGACGATTTC
GGAAGCTACG TCTACGAATA TGTCTCATTG CCCGGCACGC TCGTCTGGAA CTCGCGGGAC
AACGACCTGA ACGCGACCGA GGGCTTCTAC GTCGCGGCCG GAGCCACGCC GTTCGCGGGC
ATGGGCGACA CCGGGTCGGG CGGCCAGCTC ACGCTCGACA GCCGCGCCTT CGTGGGCTTC
GGCAACGAGG ACCGGCCCTT CGTGCTGGCC GGGCGCCTGC AGGCCGGAGC GGTCCTCGGC
CCCGAACTGA TCGAGACGCC GCGGAACTAC CTGTTCTATT CCGGCGGCGG CGGCACCGTC
CGCGGCCAGC CCTACCAGTC GCTCGGCGTG CGTCCCGACC CGACGGATCC CGATTACAAG
ATCGGCGGCA CCCGCTTCGC CGCGATCTCG GCCGAACTGC GCGCGCCCAT CACGCGGCGG
ATCGGCGTCG TGGCCTTTGC GGATGCGGGC TACGTCACCG CCGAGGATAT CGACTCCGAC
CGCGACGACT GGCACGCCGG TGCAGGCCTC GGCCTGCGCT ACGACACCGG CTTCGGCCCG
ATCCGCGTCG ATGTGGCGGC CCCGGTGGGC GGCGACACCG GCGACGGGGT GCAGATCTAT
GTGGGAATCG GGCAGGCCTT CTGA
|
|---|
| Protein sequence | MSVSSYRSPS LRAALVLLAI AAAAPQARAL DRLEFRVAGS TDEVEEVIKG ASALIAARAA
EDSETQDIFS AARSEYGRLV TALYGLGYYS PVVSVLVDGR EAAQIPPLDA PETIGTIIVQ
VQVGPPFRFG AARVAPLAPE TEMPEGFRTG ERARSTLVQD AVSAAADGWR SAGFAKVDVG
SQTVVADHAR RTLDADVRMA PGPRLRFGDL RINGEQRMSE RRIRKIANLP TGETYDPEEL
ADSADRLRRT GVFRSVSLTE DETVTAPDLL GITATVVEEL PRRYSFGVEV SSLEGATISG
QWIHRNLLGG GERLTVTGEV DNLGASNSGV DYRLGVTLDR PATPTADTTL GFGVLVERLD
EEDYLADTVS LSTTLTRLFS KRLTGSLGVG YTYSDVEDDF GSYVYEYVSL PGTLVWNSRD
NDLNATEGFY VAAGATPFAG MGDTGSGGQL TLDSRAFVGF GNEDRPFVLA GRLQAGAVLG
PELIETPRNY LFYSGGGGTV RGQPYQSLGV RPDPTDPDYK IGGTRFAAIS AELRAPITRR
IGVVAFADAG YVTAEDIDSD RDDWHAGAGL GLRYDTGFGP IRVDVAAPVG GDTGDGVQIY
VGIGQAF
|
|---|
| |