| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_0881 |
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| Symbol | |
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| ID | 3718349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007493 |
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| Strand | - |
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| Start bp | 2630264 |
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| End bp | 2632225 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640072107 |
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| Product | putative soluble lytic transglycosylase |
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| Protein accession | YP_353965 |
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| Protein GI | 77464461 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCC CCAGATCCGC CCCCGCCCGT CTCCGCCTCG CCCTTCTGCT GATCCTGCCG
CTGCTCTGCG CGCCCCTCGC GGCGCGGGCC GAGGATCCGG CCGCACTGAA GGACGCGCTC
CGCGCCGCCT GGTCGAAGGA CTGGAGCGGT GCCGAGGCGC AGGCGCGCCG GTCGGGCCCG
CTCGCGCAGT CGCTCGTCGA GTGGCACCGG CTGCGGGCGG GCGAGGGCAG CCTGACCGAC
TACGAGGCCT TCCTCGCGCA GCATCCCGAC TGGCCGGGGC TGAAGCTCCT GCGCGACAAG
GGCGAGGAGG CGGTGGCCCG CTCGGCCACG CCTGAGCGCG TGATCGCGTG GTTCGGCTCG
CGTCCGCCCG CGACCGCCAC CGGGGCCATC GCGCTCGCCC GCGCCCACGC CGCGGCGGGC
CAGCAGCCCG AGGCCGAGAC GGTGATCCGC CGCGCCTGGA CGACGCTCGC CTTCACCGCA
GAGGAGGAAT CGGCCGCGAT CGGCGCCTTC CCCGAGGTGC TGGCCCGGGC GCACGAGGCG
CGGCTCGACA TGCTGCTCTG GGAGAACCGG CCCGAGCAGG CGCGGCGGAT GCTGCCGCGC
GTGTCGGACG GCTGGAAGCG GCTCGCGGCG GCGCGGATGG CGCTGCGCGC CGATGCCGAC
GGGGTGGACG GGCTGATCGC GGCCGTGCCC GCGGCGCTCG CCGCCGATCC CGGCCTCGCC
TACGAGCGGT TCCTCTGGCG GGCGCGCAAG GGCCGCGACG CCGATGCGGC GCAGCTGCTT
CTGGAGCGGT CGGCCAGCGT GGCGGGCCTC GGCAGCCCCT CGGCCTGGGC GGGGCGGCGC
GCGGTGCTGG CGCGGGCCCT GAACGAGGAG GGCGATCCGA AGACCGCCTA CCGGATCGCC
GCGAGCCACC ATCTCGAGGG CGGGGGCGAC TTTGCCGAGC TCGAGTTCTT CGCGGGCTTC
ATCGCGCTGC GCAAGCTCGG CGACCCGGCC GCGGCGCTTC AGCATTTCCA GCGGCTGCAG
GCGGCGGTGC GCACGCCGAT CAGCCTCTCG CGGGCGCATT ACTGGCAGGG ACGGGCGCTC
GAGCAGCTCG GACGCTACGA CGAGGCGGGC GCGGCCTTCG CGGCGGGGGC GCGCTACCAG
ACCGCCTATT ACGGGCTTCT CTCCGCCGAG CGCGCGGGCA TCCCGCTCGA TCCGGCGCTC
GTCTCGGCGC CGCGGGCGGG CGACTGGCGG CAGGCGGGCT TCGCCTCCTC CTCGGTGCTG
GCGGCGGGGC GGCTTCTTCT CGCGGCGGGC GAGCGCGATC TCGGCAAGCG GTTCCTGCTG
CATCTGGCCG AGAGCCTGAA GGCCCCGGAT CTCGAGCGGC TGTCCGAGAT GGCGCTCGAG
ATGGGCGAGC CGCATGTGGC GGTGCTGATC GCCAAGCAGG CCGCCGAGGA GGGCACGATC
CTGCCGCGCG CCTATTTCCC GGTGCCGGAT CTCGTGCCGG GCGACGGGCT GCCGGTGAGC
CGGGCGCTGG CCCTGTCGAT CGCGCGGCGC GAGAGCGAGT TCAACCCGGT GGTGGTGAGT
CCGGCCGGCG CGCGGGGCCT CATGCAGGTC ATGCCGGGGA CGGCGAAGCT CATGGCGCCC
AAGGTGGGGC TCGGCTACGA GCCTGCGAAG CTCACGCAGG ATCCGGCTTA CAACGTGCGG
CTCGGCACGG CCTATCTCGC GCAGCTGGTC GAGGAGTTCG GCCCGTCGCT CGCGCTGGTG
GCCTCGGGCT ACAATGCGGG CCCGGGCCGC CCGCGCCGCT GGGTGACCGA GTTCGGCGAC
CCGCGTGCCG AGGATGTGGA TGCGGTGGAC TGGGTGGAGC AGATCCCCTT CTCCGAGACC
CGCACCTACG TCATGCGCGT GACCGAGTCG GTGGTGATCT ACCGCGCCAA GCTCCGCGGC
AGCGGCGGCC CCGTCCGCAT CACCCCCGAG CTGAAGGGGT GA
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| Protein sequence | MSRPRSAPAR LRLALLLILP LLCAPLAARA EDPAALKDAL RAAWSKDWSG AEAQARRSGP
LAQSLVEWHR LRAGEGSLTD YEAFLAQHPD WPGLKLLRDK GEEAVARSAT PERVIAWFGS
RPPATATGAI ALARAHAAAG QQPEAETVIR RAWTTLAFTA EEESAAIGAF PEVLARAHEA
RLDMLLWENR PEQARRMLPR VSDGWKRLAA ARMALRADAD GVDGLIAAVP AALAADPGLA
YERFLWRARK GRDADAAQLL LERSASVAGL GSPSAWAGRR AVLARALNEE GDPKTAYRIA
ASHHLEGGGD FAELEFFAGF IALRKLGDPA AALQHFQRLQ AAVRTPISLS RAHYWQGRAL
EQLGRYDEAG AAFAAGARYQ TAYYGLLSAE RAGIPLDPAL VSAPRAGDWR QAGFASSSVL
AAGRLLLAAG ERDLGKRFLL HLAESLKAPD LERLSEMALE MGEPHVAVLI AKQAAEEGTI
LPRAYFPVPD LVPGDGLPVS RALALSIARR ESEFNPVVVS PAGARGLMQV MPGTAKLMAP
KVGLGYEPAK LTQDPAYNVR LGTAYLAQLV EEFGPSLALV ASGYNAGPGR PRRWVTEFGD
PRAEDVDAVD WVEQIPFSET RTYVMRVTES VVIYRAKLRG SGGPVRITPE LKG
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