| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05460 |
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| Symbol | RSp0310 |
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| ID | 1222442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 405147 |
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| End bp | 406499 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240170 |
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| Product | macrolide-efflux transmembrane protein |
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| Protein accession | NP_521871 |
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| Protein GI | 17548531 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.810092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.114702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CACGCAAGAA CACTGACCGC GCCGAAGCGG CGCTGCTCCG GAATGCAAGT
ACGACGCACG AGCCGGCGAA TCCGTGCTGG ATCCCCGACG CCGCCGCCGC GGGGTTGCAC
CCGGGCCCTC GCTGGCGGGC GCGATTCTGG GCGATCTTCG GCGGGCAAGC GCTGTCGCTG
ATCGGCTCGG CGCTGACCCA ATTTGTCCTG CTCTGGTGGA TCACCGATAC CACGGGCAGC
GTATCGGCGC TGGCCACGGC CGGCCTGGCG GCGCTGCTGC CCCAAGCCGT GCTCAGCCCG
CTCGGCGGCA CGTTTGCGGA CCGCTACAGC CGCCGGCTGC TGATGATCGT GGCCGACGGC
ATCAGCGCCT TGTGCATGCT GCTGCTGATC GCGCTGTTCC TGACCGGCCG GATCGCGCTG
TGGCATGCCT ACGTGATGAT GGCGATCCGG AGTGCCGCGC AGGCATTCCA GGCGCCGGCC
GCGGCGGCCA GTGTGACCAT GCTGGTGCCT GGCGGCTTCC TGGTTCGCGC GGCGGGGCTG
AACCAGTCCT TGCAAAGCCT CACGCTGGTT GTCGCGGCAC CCCTGGGCGC GCTCGCCATC
GGCGTGATGC CGATCGGCTG GGCGCTGGGC ATTGACGTCG CCACGGCCTT GCTCGGCATC
GCGCCGCTGC TGTGCTGCCG CATTCCACAG GCTTGCGTGT CCAGCGGCCA AAAGACCGGC
CTGTGGCCCG CGTTCCGGGA AGGCGTGGAT CTGGTCTGGA AGACACCCGG CCTGCGCTGG
CTCTATGTCT TGCTTGGCGC GGTGGTACTG ACCATCATGC CGACCTTCAC GCTGGTGCCG
CTGCTGGTGA AGACGCATTT CGGTGGCGCC GCCGCCCAGG TAGCCCTCAT GGAAGGGCTG
TCGGGTATCG GCATGGTGGC GGGTGGCCTG CTCGTGGCTG CGATGGCCCC ACGCAGGCAG
GTGGCCTGGA TTCTGTGTGG CTTTGCAATG TCTTGTGTCG CGCTGGCGCT GACTGCGCTG
GCGCCGGGCA GCCTGTTTGG CGTGGCCGTC GCCTGGTGGG TCATCAGCGG CATCACCTTC
GTGTTCGGCA ACGCTCCGCT GACCGCGCTG CTTCAGACCA TCGTGCCGAA CCACCTGCAG
GGACGCGTGC TGTCGCTGTT GAACACCACC ATGGGCCTGG CCGCGCCCGT GGGCTTGGCG
CTCTTCACCC CGCTGGGTGA AGTGATCGGT GTGCGTGCGC TCTTCGCGAT CGCCGGCCTG
CTCGGCGCAG CGGCGAGCCT GGCCGGATTC CTGTCTCCGT CATTGATGCG TTTGGACAGG
CGACCCTCAA GGTCCGAGGC AAGAACGGAC TGA
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| Protein sequence | MNAPRKNTDR AEAALLRNAS TTHEPANPCW IPDAAAAGLH PGPRWRARFW AIFGGQALSL
IGSALTQFVL LWWITDTTGS VSALATAGLA ALLPQAVLSP LGGTFADRYS RRLLMIVADG
ISALCMLLLI ALFLTGRIAL WHAYVMMAIR SAAQAFQAPA AAASVTMLVP GGFLVRAAGL
NQSLQSLTLV VAAPLGALAI GVMPIGWALG IDVATALLGI APLLCCRIPQ ACVSSGQKTG
LWPAFREGVD LVWKTPGLRW LYVLLGAVVL TIMPTFTLVP LLVKTHFGGA AAQVALMEGL
SGIGMVAGGL LVAAMAPRRQ VAWILCGFAM SCVALALTAL APGSLFGVAV AWWVISGITF
VFGNAPLTAL LQTIVPNHLQ GRVLSLLNTT MGLAAPVGLA LFTPLGEVIG VRALFAIAGL
LGAAASLAGF LSPSLMRLDR RPSRSEARTD
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