| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS05376 |
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| Symbol | RSp0955 |
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| ID | 1223262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1200016 |
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| End bp | 1201122 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637240815 |
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| Product | porin signal peptide protein |
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| Protein accession | NP_522516 |
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| Protein GI | 17549176 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0326647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT CGCTTATGAC GGTCGCCGTT CTGGGAACCA TCTCTGCCGC GGCACACGCG
CAAAGCAGTG TCACGCTGTA CGGCCTCATC GATGTCGGCA TTCGCTACAA CACACATCAG
AATGCCGCGG GCGACAGCAA GATCGGCATG GGCAACGGCG GCCTGCTATC CGGTAGCCGT
TGGGGTCTGA TGGGCAACGA AGACCTGGGC GGCGGCAACA AGGCGTTCTT CCAGCTGGAG
TCCGGCTTCA CCCCCGGCAC AGGCAGCACG CAGCAATCCA CGCCGTCCGG CAACGCCCGC
CTGTTCGGCC GAACCGCAGC CGTGGGGCTT TCGTCGCAGA CCTATGGCGA GATCGCGCTG
GGCCGCCAGT ACACGCTGGT CCACGAGATG GCGTACACGC ACGACATCTA CGCGCTGTCG
AACTATGTGG GCACCGTGGG CTTCCAGGGT GCAGGCCTGA CCGGCGGCGG CCGACTCGAC
AACACCGTGC GCTATACCTC GCCGAGCTTC GGTGGCTTCA CATTCAAGGG TGCCTACACC
TTCGGCGAAA CGGCGGGCGA CACCAAGCAC AACGCGTCTC CGGCGGTGGC GGCCTCTTAT
GACAATGGCC CGCTCAGCGT CGGCGCAGCG TTCCAGATCA TCAACAACAT CGGTGGCCTG
ACGCCGGCAA CAACGGCCTA CGGCAGCACG TATTTCGGCA TCACGATTCC GGACAGCACG
CAGAAGGTAT TCACCGTGGG TGCCACATAC AAGCTTGGCG CGAGCAAGCT GTATGCGTCC
TACATCTACA GCAACGTCTA CCCGGCGGGC TATCGGAACG ACTCGTTCTC CGTCGCGGTG
AGCTATCCGC TCACGCCAGC CCTTGAGCTA AAGCTGCCCG TCTATGTGGA CCGGCTCAAG
CATGCCGGAC AGAGCGGCAC CCGCATTACC GGCGGCCCGC TGCTCGACTA CAGCCTGAGC
AAGCGCACGG ACGTCTATGC GGGCGTCGAC TACACGAGGC TCAACGGCGC GTGGCAAACG
CTAGCCGGTA CGTCGGGGTT CACGCTGCCC GTCAGCGGGC GCAATTCCGT GTTTGAGGCC
ACGGTTGGCC TCCGGCACAA GTTCTGA
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| Protein sequence | MKRSLMTVAV LGTISAAAHA QSSVTLYGLI DVGIRYNTHQ NAAGDSKIGM GNGGLLSGSR
WGLMGNEDLG GGNKAFFQLE SGFTPGTGST QQSTPSGNAR LFGRTAAVGL SSQTYGEIAL
GRQYTLVHEM AYTHDIYALS NYVGTVGFQG AGLTGGGRLD NTVRYTSPSF GGFTFKGAYT
FGETAGDTKH NASPAVAASY DNGPLSVGAA FQIINNIGGL TPATTAYGST YFGITIPDST
QKVFTVGATY KLGASKLYAS YIYSNVYPAG YRNDSFSVAV SYPLTPALEL KLPVYVDRLK
HAGQSGTRIT GGPLLDYSLS KRTDVYAGVD YTRLNGAWQT LAGTSGFTLP VSGRNSVFEA
TVGLRHKF
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