Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05194 |
Symbol | RSp0229 |
ID | 1222360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 286439 |
End bp | 287917 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240088 |
Product | putative benzaldehyde dehydrogenase oxidoreductase protein |
Protein accession | NP_521790 |
Protein GI | 17548450 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0026447 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.397505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCC CGCAAGCAAT GCGCTTTCTG GACGATGCCC AGTGGGATGG CCTGCTGTTC CAGGGCAGAT GGGTGCCCCC GCTGCGCCGA CGGACCGCCG ACGTGATGGA GCCGGCGACC GGCCGCAAGC TGACCCGTGT CGGCCTGGCC GATGCCCAGG ACGTGGACGC CGCGGTGGAG GCCGCAGCGG CCGCCCAGCC GGCCTGGGTG GCCATGCCGC CGCGCGAGCG CGCCAACGTG TTCCGCCGTG CCGCCATGCT GTTCGAGCAG CATTTCGACG AACTCGCCCT GGCCATTGCG CGGGAAACCG GCGCGGCCCT GTTCAAGGGC GAACATGAGG TGCGCGAGGC GATCACGCTG TGCCACGTGG CGGCCGGCAT GCCGCTGGAG GCGCAGGGCC AGGTGCTGGC CAGCCCGGCC GGCCGCCTGA GCTACGCGCG CCGGGCGCCG TTCGGCGTGG TGGGCGTGAT CTCGCCGTTC AACTTTCCGC TGTTCCTGAC GCTGCGCTCG GTGGCGCCGG CGCTGGCGGC CGGCAACGCG GTGGTGATCA AGCCGGATCT GCGCACGCCG GTGTCCGGCG GCTACGTGAT CGCGCGCGTG TTTGCCGAGG CGGGCCTGCC GGCCGGGCTG CTGCACGTGC TGCCGGGCGG CGCCGAGGCG GGCGAGGCGC TGGTGGTGCA TCCGCGCGTG CCGATGATTG CGTTCACCGG TTCGCCGGGT GTCGGCCGCC GCATCGGCGA GCTGGCCGGC CGGCATCTGA AGAAGGTGTC GCTCGAGCTG GGCGGCGCCA ACGCGCTGAT CATCCTCGAC GACGCAGACC TGGACCTCGC GGTCAGCAAC GCCGCCTGGG GCGCGTGGCT GCACCAGGGG CAGATCTGCA TGGCGGCCAA CCGCATCCTC GTGCACGCGT CGCTGGCCGA TGCGCTGACC GCGCGGCTGG TCGAGAAGGC CGAGCACTTG CCCGTGGGCG ATGGCGCCAG CGGGCAGGTG GCGCTCGGGC CGCTGATCGA CCAGAAGCAG TTGCAGCGCG TGCACGCCAT CGTGCAGGAC AGCGTGGCGG CGGGCGCCAG GCTGCTCGCG GGCGGGTCGT ACGAGCAGCT GTTCTACCGT CCCACCGTGC TGGCCGGCGT GCGGCCGGGC ATGCGCGTGT TTGACGAAGA GGTGTTCGGC CCGGTCGCCA ACATCATCGT CTTCCGGGAC GACGACGAGG CGGTGGCGCT CGCCAACGAC AGCCAGGGCG GGCTGGCCGC CGGGGTGATC TCGGCCTCGG TGGGGCGTGC CATGGCGCTC GGGCAGCGCC TGCGCGTCGG CATGGTCCAC ATCAACGACC AGACCGTCAA CGACGACTGC GTCAACCCCT TCGGCGGCCC CGGCATCGCC GGCAACGGCA CCAGCATGGG CGGTCCGGCC GACTGGGAGG AATACACCCA GTGGCGGTGG GTGACGGTCA AGGAAAGCGC GCCGCGCTAT CCGTTCTGA
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Protein sequence | MNAPQAMRFL DDAQWDGLLF QGRWVPPLRR RTADVMEPAT GRKLTRVGLA DAQDVDAAVE AAAAAQPAWV AMPPRERANV FRRAAMLFEQ HFDELALAIA RETGAALFKG EHEVREAITL CHVAAGMPLE AQGQVLASPA GRLSYARRAP FGVVGVISPF NFPLFLTLRS VAPALAAGNA VVIKPDLRTP VSGGYVIARV FAEAGLPAGL LHVLPGGAEA GEALVVHPRV PMIAFTGSPG VGRRIGELAG RHLKKVSLEL GGANALIILD DADLDLAVSN AAWGAWLHQG QICMAANRIL VHASLADALT ARLVEKAEHL PVGDGASGQV ALGPLIDQKQ LQRVHAIVQD SVAAGARLLA GGSYEQLFYR PTVLAGVRPG MRVFDEEVFG PVANIIVFRD DDEAVALAND SQGGLAAGVI SASVGRAMAL GQRLRVGMVH INDQTVNDDC VNPFGGPGIA GNGTSMGGPA DWEEYTQWRW VTVKESAPRY PF
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