| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03893 |
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| Symbol | RSp0587 |
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| ID | 1222894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 722584 |
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| End bp | 723054 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637240447 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_522148 |
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| Protein GI | 17548808 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4731] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.536357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCGA GCTTGGTATT AGGACGATCG AGTGTGTCCA TGATGCTCTT CGTTATGAGC
CTGTTCTTCA CAGTAGTCAC GCATGCCCAG CAGTTGCCTG CCGACGAGAT CATCGGGGCA
TGGGAAGCCG AGGATGGAAG CGTGAAGCTC GACATGTACA AGGCAGGGCC GGAATTCGAG
GCACGTCTCC TGTATGGCAA CCAGGTCGTG GAATCTGACA ATGCCACGTT CAAGCTGGAC
ACGAAGAATC CTAATCCCGC GCTGCGTTCC CGCTCGCTGA AAAACGTCGT GTTTCTCTCG
GGTCTTCGCT GGGAGGATGG CCAATGGACC GGTGGATCAC TCTATGACGG CGCCTCCGGT
CGCACGTACA CCTGCAAGGT GACAATCAAG GACGGGAAGA TGCACTTGCG CGGGTACCTC
GGGATATCCG CCCTAGGACA AACCAAGGTA TTCCATCGTG TGAGGGGGTG A
|
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| Protein sequence | MKASLVLGRS SVSMMLFVMS LFFTVVTHAQ QLPADEIIGA WEAEDGSVKL DMYKAGPEFE
ARLLYGNQVV ESDNATFKLD TKNPNPALRS RSLKNVVFLS GLRWEDGQWT GGSLYDGASG
RTYTCKVTIK DGKMHLRGYL GISALGQTKV FHRVRG
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