Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03729 |
Symbol | RSp0638 |
ID | 1222945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 777576 |
End bp | 779243 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240498 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_522199 |
Protein GI | 17548859 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.525568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.456711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA CGAAACTGCT GCTTGGCCGT TCCAACGGGT CCACCATGCT CATGGTGGCC GCCTCGCAGG CTGCGGCCGG CCTGGGCGGC GCCGGCCTGC TGGCGATCCT GACCCATGCC GCCGGCGAAG CGGACAGGTC GCTGATGTGG CGCTACCTGC CGTGGGCCGC GGCGGCGCTG ACGCTGTTCG TCCTGGCCCA GGGCATCACG TCGCGGCTCA CCACCGCGTG CGTGGAACAG GCGATTCATG CGGTGCGCCT GCGCATCATG GGCAAGCTCG CCTCGGCGCC CCTGCAGACC TTCGAGCGCA TCAGCGAGGG CCACCTGCTG ACCCGCCTCG AGAAAGACCT GAAGGTGGTG TCCGCCACCT CCTCCGCCAT CCTGGCCGCC AGCCAGGCCG GCATGCTGTT CCTCTGTTCC ATCGCCTATC TGGCGTATCT GTCGCCCATG GCGTTCGGCA TCTGCATGGT CGTGGTCGTG CTGAGCCTGC TGCTGCATGC CATCAGGATG CGGGTGATCC ACGCCAGGAT GGAAGCCGCG ACCCAGGCCG AGACCGATCT GCTCGGCCTG ACCGGGCACC TGGTGGGCGG CTTCAAGGAA CTCAAGCTGC ATGCCCGCCG GCAACGCGAG CTCCACGCCG AGCTGGCCGC CGCTTCCGGG CACAGCGCCG AGCGCAACCG CGCGGCCTAC GTGACCGTCA GCGATCACCT GATCCTGATC CAGATCATCC TGTACAGCCT GATCGGCTCG GTGGTCTTCA TCCTGCCGCT GCTGGATGCG ACGCAGCCGC TGCTGCTGGT GAAAATCGTG GCCGTGATCC TGTTCCTGGC CGGCGCGCTC AACCAGTTCG CCGGCATCCT GCCGATGTAC ACGCAGGCCG ATGCGGCCGC CCGGCATATC GAGGCGCTGG AGCACCAGCT CACGAACGAG CCGGCCGCCG ACGGCCAGAC CGCACAGCCG CAGCCCGCAC CGGTACTGTC CGGCATCGAA CTGGAAGCCG TCCGCTACGC CTATCTGCCC GTCAACGGCC AGGGCTTCGA GGTGGGCCCC GTCAACCTGT CGATCCGGCG CGGCGAGATC GTCTTCATCA CCGGCAGCAA CGGTTCGGGC AAGTCGACCT TCCTGAAGCT GCTGACCGGC TTGCAGGCGC CCGATGCCGG CCGCATCCGC TGGAACGGCA ATCCCGTCGA TCCGGACAGC CTCGAGCGCT ATCGCGGCCT GTTCTCCGCG ATCTTCTCGG ACTACCACCT GTTCCCGACG CTCTGGGGCC TGGACGCGCC GGCCCCGGGC GCGATCGACG CGCACCTGCA GCGCCTGGCC CTGCAGGCCC TGACCGCGCT GAACGGACGC TCGTTCTCAC CGCTCAAGCT CTCCACCGGC CAGCGCAAGC GCCTCGCGCA CCTGGTGGCC CTGCTGGAAG ACCGGCCCAT CTACGTCTTC GACGAATGGG CGGCCGACCA GGACCCGGCG TTCCGGCGCT GGTTCTATCA CACGGAGCTG CCACGCCTGA AGGCGCTCGG CAAGACCGTG ATCGCGGTCA CCCATGACGA GCCGTACTTC GGCTGCGCCG ACCGCTGGCT GCACTTCGAG GAAGGGCGCT GCGTCGAGCG CGCGCCGGCG TCGGGCCTGC CGACAGCATC CGCGCCGGTC ACGCTGGCGG CGACGTAG
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Protein sequence | MRITKLLLGR SNGSTMLMVA ASQAAAGLGG AGLLAILTHA AGEADRSLMW RYLPWAAAAL TLFVLAQGIT SRLTTACVEQ AIHAVRLRIM GKLASAPLQT FERISEGHLL TRLEKDLKVV SATSSAILAA SQAGMLFLCS IAYLAYLSPM AFGICMVVVV LSLLLHAIRM RVIHARMEAA TQAETDLLGL TGHLVGGFKE LKLHARRQRE LHAELAAASG HSAERNRAAY VTVSDHLILI QIILYSLIGS VVFILPLLDA TQPLLLVKIV AVILFLAGAL NQFAGILPMY TQADAAARHI EALEHQLTNE PAADGQTAQP QPAPVLSGIE LEAVRYAYLP VNGQGFEVGP VNLSIRRGEI VFITGSNGSG KSTFLKLLTG LQAPDAGRIR WNGNPVDPDS LERYRGLFSA IFSDYHLFPT LWGLDAPAPG AIDAHLQRLA LQALTALNGR SFSPLKLSTG QRKRLAHLVA LLEDRPIYVF DEWAADQDPA FRRWFYHTEL PRLKALGKTV IAVTHDEPYF GCADRWLHFE EGRCVERAPA SGLPTASAPV TLAAT
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