Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03689 |
Symbol | RSp0275 |
ID | 1222407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 356301 |
End bp | 357506 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637240135 |
Product | hydrolase transmembrane protein |
Protein accession | NP_521836 |
Protein GI | 17548496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0493131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA GGGTGTCCCC CCGCTTCGCC ACGCGCGCAG TCGCCGCGCT CTGCCTGTCC GCTGCCGCCG GTGCCTCGCA TGCGGCGGGC GTCTATGCGC CGTACATCGA CATGACGCTC GACCCCACCC CGCTGATCGA CCAGATCGGC GTGCGGCAGG GCATCCAGCA GTTCCATCTC GCCTTCGTGA TTGCCGGCGA CGGGTGCACG CCGTCGTGGG GCGGCATCCA GGCCATCGGC AACGGCGCGA GCGGCGATCT GCTGACCACG ATCGCCGCCT CGATCACCCG CTACCGGGCC CGGGGCGGCG AGGTGTCGGT GTCGTTCGGC GGCGCGGCCG GCACGCCGCT GATGAAGGCC TGCACCACCG TGCCGGCGCT GAAGGCCGCG TACCAGACCG TCATCGATAC CTATCAGCTC ACGCATGTCG ATTTCGATAT CGAAGGCTCC GTCCAGAAGG ACACCGAGGC CGTCGCGCGC AACTTCCAGG CCATCGCGCA GCTGCAGTCG GATTTCGCGG CAAAGGGCCG GGCGCTGCAT GTCACCCTGA CGCTGCCGGT CCTGCCGTCG GGGCTCGTGC AGGACGGCAT CAACACCCTC AATGCCGCCA TCGCCAACAA GGTCGCGCTC GACACCGTCA ACGTGATGAC CATGGACTAC GGCCCGGCCG ACATCGACAT GGGCGCGGCG GCCATCAGCG CGGCGCAGGG GCTGTACGCC CAACTGGACA CCGCCTACAA GGTCGTCGGC CAGGTCAAGA CGGATGCGCA GCTGTGGCGG CTGGTCGGCG TGACGCCCAT GATCGGCATG AACGACGTGC AGAGCGAGAC CTTCACGCTC CCCAACGCGC TGACCGTGCT GGGCGCCGCG TACGGCAACG GCTACGGCAT GGTGTCCAAC TGGTCGGTCG GCCGCGACCA GGCCTGCCCG GACAACGGCG CCGTGGTCTC GCCCACCTGC TCGGGCATCG TGCAGCGCCC CTATGCCTTC GCCTCGATCT TCCGGCAGCT GCACGGCCAT TGGGGCACGG GCGTGCTGCG CGACCCGAGC TACGGCAATG CGACCGGCGG CAGCGCGCCC GCCTGGTCGG CCACGGCGGT CTACCGGATC GGCCAATGCG TGACGTACCA GGACGCGAAG TATTGCGCCC GCTGGTGGAC GCAGGGCAAC GTGCCCAACG CCGGCGGCGT CTGGGCCAAG TCGTAA
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Protein sequence | MKPRVSPRFA TRAVAALCLS AAAGASHAAG VYAPYIDMTL DPTPLIDQIG VRQGIQQFHL AFVIAGDGCT PSWGGIQAIG NGASGDLLTT IAASITRYRA RGGEVSVSFG GAAGTPLMKA CTTVPALKAA YQTVIDTYQL THVDFDIEGS VQKDTEAVAR NFQAIAQLQS DFAAKGRALH VTLTLPVLPS GLVQDGINTL NAAIANKVAL DTVNVMTMDY GPADIDMGAA AISAAQGLYA QLDTAYKVVG QVKTDAQLWR LVGVTPMIGM NDVQSETFTL PNALTVLGAA YGNGYGMVSN WSVGRDQACP DNGAVVSPTC SGIVQRPYAF ASIFRQLHGH WGTGVLRDPS YGNATGGSAP AWSATAVYRI GQCVTYQDAK YCARWWTQGN VPNAGGVWAK S
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