| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03682 |
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| Symbol | RSp0282 |
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| ID | 1222414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 364483 |
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| End bp | 366114 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240142 |
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| Product | amino-acid permease transmembrane protein |
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| Protein accession | NP_521843 |
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| Protein GI | 17548503 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00632894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.215553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAAAC ACGTACAACG CAACCTCGGC GCCTGGCCCC TGATGCTCAC GGGCCTGGGC
TCGATCATCG GTTCCGGCTG GCTGTTCGGC GCCGGCCACG CGGCAAAGGT GGCAGGCCCT
GCCGCCATCT TTACCTGGGT CATCGGCGCG GTCGTCATCC TGGCCATCGC GCTGACCTAC
GCGGAGCTGG GCGCCATGTT CCCGGAATCG GGCGGCATGG TGCGCTACGC GCGCTATTCG
CACGGCTCGC TGGTGGGCTT CGTGGCCGCC TGGGCCAACT GGATCGCCAT CGTCACCGTC
ATTCCCATCG AGGCCGAGGC CTCGATCCAG TACATGAGTT CGTGGCCATG GCCCTGGGCG
CAGGGCCTGT TCCAGCACGG CGAACTGACG CCGCTGGGGC TGGCGCTCTC CGCCGTGCTG
GTGATCATCT ACTTCCTGCT CAACTACTGG GGCGTCAAGG TGTTTGCCAA GGCCAACACC
ACGATCACCG TCTTCAAGTT CGTCATTCCC GGGCTGACCG CCGTGGCGCT GATCGGCGCC
GGCTTCCATC CGTCGAACTT CGGCGGCACG GACGCCGCGA GCTTCGCGCC GTACGGCTGG
TCGTCGGTGC TGACCGCGAT CGCCACCTGC GGCATCGTGT TCAGCTTCAA CGGCTTCCAG
AGCCCGATTA ACCTGGCCGG CGAGGCGCGT AACCCCGGCC GCAACGTGCC GCTGGCGGTG
ATCGGCTCGA TCGTGCTGGC CGCCATCATC TACGTGGCGC TGCAGATCGC CTTCCTGGGC
GCGGTGCCCG CGGAATCGCT GGTCAAGGGC TGGCACGGCA TCGACTTCCA CTCGCCGTTC
GCCCAGCTGG CCATCGCGCT GAACCTGAAC TGGCTGGCCA TCGTGCTGTA CCTCGACGCC
TTCGTGAGCC CGTCGGGCAC CGGCAGCACC TACATGGCGA CCACCACGCG CATGATCTAC
GCGATGGAGC GCAACAACAC CATGCCGGCC ATGTTCGGCC GCGTGCACCC GATCTTCGGC
GTGTCGCGTT CGGCCATGTG GTTCAACCTG GCGGTGTCGT TCATCTTCCT GTTCTTCTTC
CGCGGCTGGG GTGCGCTGGC GGCGGTCATC TCGGTGGCCA CCGTGATCTC GTACCTGACC
GGCCCGACCA GCGTGATGTC GCTGCGCAAG AGCTCGCCGG GGCTGCATCG CCCGCTGCGC
CTGCCGGGCC TGTCGCTGAT CGCACCGTTC GCCTTCGTCT GCGCCTCGCT GATCCTGTAC
TGGGCCAAGT GGCCGCTGAC GGGCGAAATC ATCGTGCTGA TGCTGGTCGC CCTGCCGGTG
TACTTCTACT ATCAGGCCAA GGCCGGCTGG CCCGACTTCA AGCGCGAGCT CAAGGGCGCC
TGGTGGATGA TCGGCTACCT GCCCGCCATC GCCGCACTGT CGTACTTCGG CAGCACCGAG
TTCGGCGGCC TGGGCCTGCT CCCCTACGGC TGGGACATGG TCATCGTGTC GGCGGTCTCG
CTGTTCTTCT ACTACTGGGG CGTGGCCAGC GGCTGGCATA CGCGCTATCT GGATGAAGTC
GAGTACGTGC ATGAAGACGC CGTCGCGCCT GCCGGCGAAC GGGTGCCGGG CGGGGTACCG
CAAGGGGTCT GA
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| Protein sequence | MEKHVQRNLG AWPLMLTGLG SIIGSGWLFG AGHAAKVAGP AAIFTWVIGA VVILAIALTY
AELGAMFPES GGMVRYARYS HGSLVGFVAA WANWIAIVTV IPIEAEASIQ YMSSWPWPWA
QGLFQHGELT PLGLALSAVL VIIYFLLNYW GVKVFAKANT TITVFKFVIP GLTAVALIGA
GFHPSNFGGT DAASFAPYGW SSVLTAIATC GIVFSFNGFQ SPINLAGEAR NPGRNVPLAV
IGSIVLAAII YVALQIAFLG AVPAESLVKG WHGIDFHSPF AQLAIALNLN WLAIVLYLDA
FVSPSGTGST YMATTTRMIY AMERNNTMPA MFGRVHPIFG VSRSAMWFNL AVSFIFLFFF
RGWGALAAVI SVATVISYLT GPTSVMSLRK SSPGLHRPLR LPGLSLIAPF AFVCASLILY
WAKWPLTGEI IVLMLVALPV YFYYQAKAGW PDFKRELKGA WWMIGYLPAI AALSYFGSTE
FGGLGLLPYG WDMVIVSAVS LFFYYWGVAS GWHTRYLDEV EYVHEDAVAP AGERVPGGVP
QGV
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