| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03189 |
|---|
| Symbol | RSp1245 |
|---|
| ID | 1223557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1583239 |
|---|
| End bp | 1583880 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637241110 |
|---|
| Product | putative arylesterase protein |
|---|
| Protein accession | NP_522806 |
|---|
| Protein GI | 17549466 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGA TCCTGCTCTA TTCCGACTCG CTCTCCTGGG GCATCATCCC CGGCACCCGC
CGGCGCCTGC CGTTCGCCGC CCGCTGGGCC GGGGTCATGG AACACGCGCT GCAGGCGCAA
GGGCACGCCG TGCGCATCGT CGAAGACTGC CTCAATGGAC GCACCACGGT GCTCGACGAT
CCCGCGCGGC CGGGGCGCAA CGGACTGCAG GGGCTCGCGC AGCGGATCGA AGCGCACGCC
CCGCTTGCCC TGGTCATCCT GATGCTCGGC ACCAACGACT TCCAGGCGAT CTTCCGGCAC
ACCGCCCAGG ACGCGGCGCA AGGCGTGGCG CAGCTGGTGC GGGCCATCCG CCAGGCGCCG
ATCGAACCCG GCATGCCGGT GCCGCCCGTG CTGATCGTGG TGCCGCCGGC CATCACCGCG
CCGGCCGGGG CGATGGCCGA CAAGTTTGCC GACGCGCAGC CCAAGTGCGC CGGCCTTGCG
CAGGCCTATC GGGCAACGGC GCAAACGCTA GGCTGCCACG TCTTCGATGC GAACAGCGTC
ACGCCGGCCA GCCGCGTGGA CGGCATCCAC CTCGATGCCG ACCAGCATGC GCAGCTGGGC
CGGGCGATGG CGCAGGTCGT CGGGACGCTG CTTGCGCAAT AA
|
|---|
| Protein sequence | MQQILLYSDS LSWGIIPGTR RRLPFAARWA GVMEHALQAQ GHAVRIVEDC LNGRTTVLDD
PARPGRNGLQ GLAQRIEAHA PLALVILMLG TNDFQAIFRH TAQDAAQGVA QLVRAIRQAP
IEPGMPVPPV LIVVPPAITA PAGAMADKFA DAQPKCAGLA QAYRATAQTL GCHVFDANSV
TPASRVDGIH LDADQHAQLG RAMAQVVGTL LAQ
|
|---|
| |