| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03157 |
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| Symbol | RSp1213 |
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| ID | 1223525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1543535 |
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| End bp | 1544902 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637241078 |
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| Product | hypothetical protein |
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| Protein accession | NP_522774 |
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| Protein GI | 17549434 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.367645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGC CACCCGCCCG TCCGCTGTGG CGGACCTTTC TGTCATTCCT CGGGCCGCTG
ATCCTCGCCA ATATCCTGCA GTCGCTGTCG GGCACGCTCA ACAACGTCTA TGTCGGCCAC
ATGCTGGGCG TGCGTGCGCT GGCGGCGGTG TCGGCGTTCT TTCCCATCGT CTTCTTCTTC
ATCGCCTTCA TCATCGGGCT GGGGGCGGGC GCGTCGGTGC TGATCGGGCA GGCGTGGGGC
GCGCACAAGC CCGAGGCGGT CAAGACCGTG GCCGGCACCA CGCTGTCGGT CGGCCTGCTG
GCCGGCGTGG CGGTGGCGCT GCTGGGCGGG CCGTTCGCGC ATGCGCTGCT GGGCTGGCTC
GGCACGCCGG CCGACATCCT GCCCGATGCC GCCGTGTATG CCAGCGTGAT GCTGTACGCG
ATGCCCGGCC TGTTCGTCTT CCTGCTGTCC ACGGCCATGC TGCGCGGCGT GGGCGATACG
CGCACGCCGC TGCGCACGCT GCTGCTGTCC ACGACGGTCG GCCTGGTGCT GACGCCTTCG
CTGATCCGCG GCTGGTTCGG CCTGCCGCAG ATGGGCGTGG CCAGCGGCGC CATCGCCACC
ATCGTGTCGC TGCTGGTCGC GCTCTCCTGG CTGGCGTTTC ATCTGCGCCG CCGGCAGCAT
CCGCTCGCGC CCGACGCTGC GCTGGCGCGC CATCTGCGGA TCGATGCCAA GGTGCTGAAG
ACCGTGCTGA AGATCGGCGT GCCGTCGGGG GTGCAACTGG TGGTGATCTC TATCGCCGAG
CTGTCGCTGC TGTCGCTGGT CAACCGCTTC GGCTCGGATG CCACCGCAGC CTACGGCGCC
GGCACGCAGA TCATCAGCTA CGTGCAGTTC CCGGCCATGT CGATCGCCAT CACGGCGTCC
ATCCTGGGCG CGCAGGCCAT CGGCGCGGGC CGGCCGGACC GGCTCGATGC CATCACGCGC
ACCGGCCTGT GGCTGAACGT GGCGATCTCC GGCCTGCTGG TGGTGGTGGC GCTGCTGTTC
TCGCGCGCGG TGGTCGGCCT GTTCACCCGC AGTGCGGCGG TGATTGATCT GACACAGAGC
CTGCTGCACA TCTCACTGTG GAGCTCGGTC GTGTTCGGCA TGGCGAGCGT GTTCGCGGGG
GTGATGCGCG CCAGCGGCAC CGTTTTCGCG CCCACCGCCA TCTCCATCCT GGCGATCGCG
GCGGTGGAGG TGCCGGTCGC GTGGATGCTG TGCCGGCACA TCGGCACCAA TGGCATCTGG
GCGGCGTATC CGGCGGCGTT CATCACGATG TTTGTGATGC AGGGGTTGTA TTACGGGCTG
GTGTGGCGCC GCCGCGCACA GCGGTTCGGA ATCCGGCGCA TGGTGTGA
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| Protein sequence | MTAPPARPLW RTFLSFLGPL ILANILQSLS GTLNNVYVGH MLGVRALAAV SAFFPIVFFF
IAFIIGLGAG ASVLIGQAWG AHKPEAVKTV AGTTLSVGLL AGVAVALLGG PFAHALLGWL
GTPADILPDA AVYASVMLYA MPGLFVFLLS TAMLRGVGDT RTPLRTLLLS TTVGLVLTPS
LIRGWFGLPQ MGVASGAIAT IVSLLVALSW LAFHLRRRQH PLAPDAALAR HLRIDAKVLK
TVLKIGVPSG VQLVVISIAE LSLLSLVNRF GSDATAAYGA GTQIISYVQF PAMSIAITAS
ILGAQAIGAG RPDRLDAITR TGLWLNVAIS GLLVVVALLF SRAVVGLFTR SAAVIDLTQS
LLHISLWSSV VFGMASVFAG VMRASGTVFA PTAISILAIA AVEVPVAWML CRHIGTNGIW
AAYPAAFITM FVMQGLYYGL VWRRRAQRFG IRRMV
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