| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS03138 |
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| Symbol | RSp1194 |
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| ID | 1223506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1516358 |
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| End bp | 1516786 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637241059 |
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| Product | proline rich transmembrane protein |
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| Protein accession | NP_522755 |
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| Protein GI | 17549415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3042] Putative hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.497108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGCG CAGTCTGTTC GGCGGGCGCT GCCGGACAAG GCGGGCGGGT TGCCGCCAGG
GGCCCGGCGC TGGCGCTTGC CATGGCGATG GGATTGGGCC TGGCGGCCTG CTCCTCGCCG
ATGCCGCCGT GGGAGCCGCC CCGCACGACG ATCCGGCCTG CGCCGCAGCC GCACGCCGTA
TCGCCGTCGC CCGCCATGGC GCAGCCGGTC CGGCCCGCGC CGTCGCCGAT TGCCCCCGAT
GCGCCTGCAT TGCCGCAGGA GTCCGCGCGA GCCGGCACGG CGAATCCGGC GTCGACCTAT
TGCCTGCAGC GCGGCGGTCA GCTCGAATTC TCGACCCGAT CGGGCGGGGG CGAGGTGGGC
ATCTGCGTGA GCCCGGGCGG GGACGAGTGC GAGGAGTGGG CGTTCCTGCG CGGCAGCTGC
ACGTGGTAA
|
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| Protein sequence | MNRAVCSAGA AGQGGRVAAR GPALALAMAM GLGLAACSSP MPPWEPPRTT IRPAPQPHAV
SPSPAMAQPV RPAPSPIAPD APALPQESAR AGTANPASTY CLQRGGQLEF STRSGGGEVG
ICVSPGGDEC EEWAFLRGSC TW
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