| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02977 |
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| Symbol | RSp0143 |
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| ID | 1222546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 163855 |
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| End bp | 166119 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637240002 |
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| Product | putative GSPD-related protein |
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| Protein accession | NP_521704 |
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| Protein GI | 17548364 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.220061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG GACAGGCATT GATTCGCACG CTTCTCGTCG CCTGCATGGC CGTGTCAGTC
GCCGGTTGCG GCGAATTGCC GCCCTATCGC GAAGGTGAAG CGCTGAGCGC CGAAGGCAAG
AACGAAGCCA GTCTCGAACG ATTCGAGACC GCCGCCAAGG CCCAACCGAC CAACGCGCGC
TATCGTGCGG CCTATCTGCA GGCAAGGGAC AGGACCGTCA ACGGTTGGCT GGACGAAGCG
GAACGGCTGC GTCAGACCGG CAAGCCCGAC GCGGCGCGCA AGATGTACGA ACGTGTCCTG
GCGCTTGCGC CGGAAAACGC GCGAGCGCGG GCGGGCCTTG AGCAAGGGGA GCGTGACCGG
CGGCACGCCA ACCTGGTGCA ACAGGCCGAG GATGCCCTCA AGAAAGGCGA GCGCGATACG
GCACTGGCCA AGCTGCACCT CGCCCTGGCA GAAAACCAGC AATTCAGGCC GGCACTGGCC
CTTCAGCAGC GGATCGAACA ACCCACCGGA GACAGCCCGG AGCGCGCATT GTCGGCGGCG
TTCCGCAAGC CGATCAGCCT CGAATTCCGC GACGCGCAGA TGCGGCAGGT GTTCGAGGTG
CTGTCTCGTG CGTCGGGCCT GAACTTCGTG TTCGACAAGG ATGTCCGCAC CGATCAGAAG
GTGACGGTAT TCCTGCGCAA CAGTACGGTC GCCAACGTCG TCAACACGGT GCTCCTGACG
AATCAGCTCG AACAGCGGGT GCTGGACGGC AACTCGATCC TGATCTATCC CAACACACCG
GCCAAGCAGC GCGACTACCA GCCGCTGACC GTGCGCACGT TCGTGCTGAG CAATAGCGAC
GCGAAGGATG TCGCCAATAC CGTCAAGACG ATCCTGAAGA CGCGCGACAT TGTCGTCGAC
GAAAAGCGCA ACATGATCGT GATGCGGGAT ACCCCCGATG CCATCCAGGC AGCCGAAAAG
CTGGTCGCCG TGCACGAGAT GCCGGAACCG GAGGTGATGC TGGAGGTGGA GATTCTCGAG
GTCAAGCGTT CGCGCCTGCA GGACCTGGGT ATCCAGTTGC CGAGCCAGCT GTCGCTGACG
CCGCTGGCCA GCAGCTCCGG CGGCACCTTG ACACTTGACG ACCTGAGACA CCTGAATCCC
ACGCGTATCG GCGCAACGGT CAGCCCCTTG AACGTCAATG TCAACGCGGC TGTCACCGAC
ACCAATGTCC TGGCGAATCC GCGTGTACGG ACCCGGAACA AGGAAAAGGC ACGCATCCAG
GTCGGCCAGC GTGTGCCGAA TGTCACCACC ACGTCAACTG CCACGGGCTT TGTTGCCGAA
AACGTCCAAT ACGTCGACGT CGGCCTAAAG CTGGAAGTGG AACCAACGGT CACGCCGGAC
AACGAGGTCA CCATCCGCAT CAATCTGGAG GTCAGCGACA TCATCTCGCA GGTGCAGACC
AAGAGCGGTT CCATTGCCTA CGAGATCGGA ACACGAAACG CCACGACACT GCTCCGGCTC
AAGGATGGCG AAAACCAGAT ACTGGCGGGT CTGATCCAGG ATGAAGACCG GGTCTCGGGC
AATCGTGTCC CCGGCCTGGG CGACATCCCC GCGCTGGGCA GACTGTTCGG CGCCCAGAGC
GACAACAAGC TCAAATCGGA GATCGTCCTG TCGATCACGC CCCGCGTCAT CCGCCCTGCG
CAGCGGCCGA ACCTGGGCTC TGCCGAGTTC GACAGCGGTA CCGAATCGAG CTTGCGGCTC
ACGTCGCCGA TGCTGCGCGA GCGGGGTGCG CCGGTACCAA GCCCTGTTGC GCCAGCCGCC
GCCCCCACGC CGTCAACCGA CGCCTCCAGT ACGCCGCCAC AACCGGTAGC CGCCGCAGGC
GGCGGGTCCG CGCTGACGAT CCAAGGCCCA TCGTCCGTGC CCGCCGGCTC AACCTTCGAT
GTCCTGGTCA ACGTCCAGCC CGAACGCCCA TTCACCAGCC TTCCGCTCAC CCTGCAGTAC
AACCCGGCCC AACTGCAGAT CATCTCGGTC ACCCCCGGCA GCCTGGTATC CGCGAACGAG
GTCTTCGCAA ACAACATCGA TGCGGCCAAA GGGCTGGTCT ATATGACGAT GAATGCCAAG
CAAACGCAGG GCAAGGACGG TGCGGGGAAT GTGGTGCGCC TCACCTTCAA GGCACTGGCC
GCGGGCGAGA CGAGCATCCA CATGCAGGAT CAGATGCTGA TCACCCCCTC CGGGATGGCG
AGCCTGAAGC CGACGGCACC GTTGGTCATG ACTGTTCAAC CATGA
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| Protein sequence | MNTGQALIRT LLVACMAVSV AGCGELPPYR EGEALSAEGK NEASLERFET AAKAQPTNAR
YRAAYLQARD RTVNGWLDEA ERLRQTGKPD AARKMYERVL ALAPENARAR AGLEQGERDR
RHANLVQQAE DALKKGERDT ALAKLHLALA ENQQFRPALA LQQRIEQPTG DSPERALSAA
FRKPISLEFR DAQMRQVFEV LSRASGLNFV FDKDVRTDQK VTVFLRNSTV ANVVNTVLLT
NQLEQRVLDG NSILIYPNTP AKQRDYQPLT VRTFVLSNSD AKDVANTVKT ILKTRDIVVD
EKRNMIVMRD TPDAIQAAEK LVAVHEMPEP EVMLEVEILE VKRSRLQDLG IQLPSQLSLT
PLASSSGGTL TLDDLRHLNP TRIGATVSPL NVNVNAAVTD TNVLANPRVR TRNKEKARIQ
VGQRVPNVTT TSTATGFVAE NVQYVDVGLK LEVEPTVTPD NEVTIRINLE VSDIISQVQT
KSGSIAYEIG TRNATTLLRL KDGENQILAG LIQDEDRVSG NRVPGLGDIP ALGRLFGAQS
DNKLKSEIVL SITPRVIRPA QRPNLGSAEF DSGTESSLRL TSPMLRERGA PVPSPVAPAA
APTPSTDASS TPPQPVAAAG GGSALTIQGP SSVPAGSTFD VLVNVQPERP FTSLPLTLQY
NPAQLQIISV TPGSLVSANE VFANNIDAAK GLVYMTMNAK QTQGKDGAGN VVRLTFKALA
AGETSIHMQD QMLITPSGMA SLKPTAPLVM TVQP
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