| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02972 |
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| Symbol | RSp0148 |
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| ID | 1222551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 168506 |
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| End bp | 170191 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240007 |
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| Product | putative general secretion pathway GSPE-related protein |
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| Protein accession | NP_521709 |
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| Protein GI | 17548369 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.976775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC CACACACGCC GGCCCTCTCC GTCGAGCTGC TGCGGCAGCT GCGCGAAGCC
ACGCACACCA GCGGCGACAC GTTGTTGGCG ACGATTGCCC GATCGCTGCA GGTCGATGAG
CGCGGTGCGC TGGCGGCGCT GGCCGCCTGC CTGGCATTCG ACTGCGTGGA GACCGCGCAG
ATGTTCCACT GGACACCCGC CGAGGCCCGA CTGCCTTTGT CGCGGGCCAT GCAGCGCGAT
TGCGCCTTGT TCCTCGATCC GGCGGCCGAC GACGGGTATC TGGCCGTGAT CCACGACCCC
TTCGATGCAG GGCTGGCGCA ATGGCTGGGC GGATTGGCCG ACGCACCGGT CCGCTTCGTA
CTGGCCATGC GCGCCGACAT CCGCGCTTAT CTTGCGAAGC GCGAAGACTC GGTGCGAGCC
ATGGAAAGCC TGGCGGCACC GCAAGCGCTT GCATCTCGCG GCGCGTCCAC TTCAGCGGAA
ACGCTTTCAC TGGCGGCCAT CGCGGAAGAC GGTAGCCCGA TCGTCAAGAT CGTCAATTCC
ACGCTCTACG ACGCGCTCAA GGCGGGTGCC AGCGACATCC ATATCGAGAG CGTGCATCAA
GGATTGCATA TCAAATACCG TATCGATGGC GTGCTCGATA CCGTCAGTCG GCTGCAAGGC
AGCGAAACCG CCGAACAGGT GATCTCGCGG CTCAAGGTGC TGGCCGAACT CGATATCTCG
GAGCGCCGCG TGCCGCAGGA TGGGCGCTTC AAGATCGGCA TGGCCGGCCG CGAGATCGAC
CTGCGCGTGT CGGTCATGCC AAGCATCCAT GGCGAGGATG CGGTGCTGCG GATCCTGGAC
AAGAAACAAT TGCTGGCGGA CCGTGCCGCA CTGACACTGG ACATCCTCGG CTTCGATGCC
GGGTCGCTTG CGGCCATCCG TGACCTCGCC GCCGCACCCT ACGGGATGCT GCTCGTCACC
GGCCCGACCG GAAGCGGCAA GACAACCACA CTCTATGCCG CCATCTCCGA AATCCATACC
GGCCACGACA AGATCATCAC GATCGAAGAC CCGGTGGAAT ACGAGTTGCC CGGGGTGCTG
CAGATACCGG TCAACGAGAA GAAGGGACTG ACCTTTGCGC GCGGACTGCG TTCGGTCCTC
CGGCACGATC CGGACAAGAT CATGGTGGGC GAGATCCGCG ACGCGGAAAC CGCGGAGATC
GCCGTGCAAT CGGCGCTCAC CGGCCACCTC GTGCTGTCTA CGGTGCATGC CAACAGCGCG
TTCGATGTTT TCAACCGCTT CACGCACATG GGGCTGGACC CCTATGCACT GACCTCCGCC
CTGAACGGCA TCTCCGCCCA GCGGCTGCTG CGCAACGTGT GCGAGCGCTG CGCGGTGGAA
CAGGCCCCGA CCGCCGCCGA ACTGGCCCGG CTCGGCCTGT CTGCAAGCGA CGTCGGCGGG
CTGCGCTTTC GCGCCGGGCG CGGCTGCGGC GACTGCCGGG GAACCGGCTA CAAAGGACGC
ACGGCCATCG CCGAGATCCT GCGCATGGAT GACGCCCTGC GCGAACTCAT CACCAGCAAG
GCGTCCATTA CAGCGATCAA GGAGCACGCC CGCAACACAG GCACGCGATT CTTGCGCGAG
GCCGCGCTCG AGCTTGCCCG CGGCGGCCGC ACCACGTTGC TGGAAGTCGC ACGGGTGACC
CTATGA
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| Protein sequence | MMTPHTPALS VELLRQLREA THTSGDTLLA TIARSLQVDE RGALAALAAC LAFDCVETAQ
MFHWTPAEAR LPLSRAMQRD CALFLDPAAD DGYLAVIHDP FDAGLAQWLG GLADAPVRFV
LAMRADIRAY LAKREDSVRA MESLAAPQAL ASRGASTSAE TLSLAAIAED GSPIVKIVNS
TLYDALKAGA SDIHIESVHQ GLHIKYRIDG VLDTVSRLQG SETAEQVISR LKVLAELDIS
ERRVPQDGRF KIGMAGREID LRVSVMPSIH GEDAVLRILD KKQLLADRAA LTLDILGFDA
GSLAAIRDLA AAPYGMLLVT GPTGSGKTTT LYAAISEIHT GHDKIITIED PVEYELPGVL
QIPVNEKKGL TFARGLRSVL RHDPDKIMVG EIRDAETAEI AVQSALTGHL VLSTVHANSA
FDVFNRFTHM GLDPYALTSA LNGISAQRLL RNVCERCAVE QAPTAAELAR LGLSASDVGG
LRFRAGRGCG DCRGTGYKGR TAIAEILRMD DALRELITSK ASITAIKEHA RNTGTRFLRE
AALELARGGR TTLLEVARVT L
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