| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02394 |
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| Symbol | RSp1057 |
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| ID | 1223369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1338620 |
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| End bp | 1340035 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240922 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_522618 |
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| Protein GI | 17549278 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.38113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCGCA CCATGCAACT CGAACTCGAT CCCCTCCATC CTCAGCGTAC GTTGGTCGAC
CAGATTGTCC AGGGCATTCG CGCCGCCGTG GACAACCACA GCCTGCCGCC CGGCACCCGG
CTGCCCTCGG TGCGCAAGCT GGCGCAGGCG CACGGCATCA GCACGTTCAC CGTTGCCGAG
GCCTATACCC GGCTGGCGGC GCTGGGCGCC ATCGTCGCGC GGCCGCGCTC GGGCTACCTG
GTGGCGGCGC GCGCACCGGT CCAGCCGGTG CCGGTGGCGC CCCGCTGGGA GCCGCCCGCG
CTCAACGCGG CCTGGCTGCT GTCGGACGTG TTCGCCGACC GCTCCATCGC CATCAAGCCG
GGCTGCGGCT GGCTGCCGAA CGACTGGCTG GACGAGCGCG GCGTGCAGGA AGCGATGCGC
ATGGTCAGCC GCGTGTCGGC GCTGCGGGTG GCGGGCTATG GGCACCCATG GGGCTACGCG
CCGCTGGGCG AATATGTGGC GCAGTCGCTC GCGCTGCGCG GCCTGCCCGT CGAGCGCGCC
CAAGTGCTGC TGACCAGCGG CGCCACCCAG GCGCTGGACC TGATCGTGCG CACGCTGTTC
AAGGCGGGCG ACGTGGTGGC GGTGGAAGAT CCGGTCTACT GCAACGTACT CCAGGTGCTC
AAGCTGGCCG GCCTGCGCGT GGTGGGCGTG CCGCGCACCC CCGAAGGGCT CGACACGGCC
GCACTGGAAA CCGTGCTGCG CCAGGACGAG GCCAGCCGCC CGCGCGCCCT CTTCGTCAGC
ACCGTGCTGC AGAACCCGAC CGGCTCGTCG ATGACGGCGC AGAACGCCTA CCGCGTACTG
CAGCTGGCCG AGCAGCACGG CCTGTGGATC GTCGAGGACG ATCTGCACCG CGAGCTCGCC
GACCCCGCCG CGCCGATGCT GGCCGCGCTC GACGGGCTGC GCCGCACGCT CTATGTGAGC
GGCTTCTCCA AGACCATCTC GCCGTCGCTG CGCGCGGGCT ACGTGGTGGC GGACGCAGCC
ATCACGCGCG AACTGGCGCG GACCAAGATG GCGGTGGCGC TCACCTCGTC GGAGATCACC
GAGCGCATCG TGCACGCCTT CGTGACACGG CCGGCCTACG CGGAGCACGT GGCCCGCCTG
AACGCACGGC TGGGCGCGGC GCATGCCGGC GTCGAGGCGA CCATGCGCGA GCACGGCGCC
GTCGTGTTCG ACACGCCCGG ACGCGGGCTC TTCCTGTGGG CGAGGCTGCC CGGCCATGCG
GATGCGTCCG CGCTGGCCGA CCGCGCCATC CGCGGCAATA TCTGGCTGGC GCCGGGCCAG
TACTTCCGCC CGGACGACGC GGCCAGTCCG TGGCTGCGCT TCAATGTCGC TTACTCGGGC
GACCCGGCGC TGTGGGATTT CCTGGCGAGC GCCTAG
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| Protein sequence | MHRTMQLELD PLHPQRTLVD QIVQGIRAAV DNHSLPPGTR LPSVRKLAQA HGISTFTVAE
AYTRLAALGA IVARPRSGYL VAARAPVQPV PVAPRWEPPA LNAAWLLSDV FADRSIAIKP
GCGWLPNDWL DERGVQEAMR MVSRVSALRV AGYGHPWGYA PLGEYVAQSL ALRGLPVERA
QVLLTSGATQ ALDLIVRTLF KAGDVVAVED PVYCNVLQVL KLAGLRVVGV PRTPEGLDTA
ALETVLRQDE ASRPRALFVS TVLQNPTGSS MTAQNAYRVL QLAEQHGLWI VEDDLHRELA
DPAAPMLAAL DGLRRTLYVS GFSKTISPSL RAGYVVADAA ITRELARTKM AVALTSSEIT
ERIVHAFVTR PAYAEHVARL NARLGAAHAG VEATMREHGA VVFDTPGRGL FLWARLPGHA
DASALADRAI RGNIWLAPGQ YFRPDDAASP WLRFNVAYSG DPALWDFLAS A
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