Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02367 |
Symbol | RSp1030 |
ID | 1223342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1303395 |
End bp | 1304147 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637240895 |
Product | hypothetical protein |
Protein accession | NP_522591 |
Protein GI | 17549251 |
COG category | [R] General function prediction only |
COG ID | [COG3687] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.117709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCTG AAGCAACCCG ATCCGCCGCC GGCGGTCGCC CTTACTGGAA CGGAACGGCT GTCCGCAGCC GCCTGTTCGA TGCGCTATCG CTGCTGCTGC CCGCGGGAGA AGCCTTCCTG ATCGAGACGC TGCAGGCGTG GCGCGCGCAA GCCTCAACCC CGCACGACGA TGCGCTGCAC GACGAGATCG ACCGCTTCAT CCGCGAGGAA GGCGCGCACC AGCGCGCGCA TGCCCGCTAC AACGCCGCGC TGATCGCCGG CCTGCCCGGC GCGGAGGCGG TCGCCCGGCG GGCGGAGCGC GTGGCTGCCG GCCTCGCGGA TCTCGGCCTG CCGATGCAGG TCGCGCTGGC GGCGGCGTTC GAGCAGCTGA CCGCGCTGGT CTCGCGCGAG ATCGTCGAGC ATGACACGCT GCTCGTCGAT GACGGCTCCC AGCCGAGCCG CCTGTGGCGC TGGCATGCGC GCGAAGAGCT CGACCATTGC GACGTTGCGC TGGCGGTTGC CGCGCGGGGC GCGCCGAGCC GCTGGCTGCG CCGGCTGGCG CTCGTGCTGG CCACGGGCTA TCTGGCCTCC GACCTGGTGC GCTATACCTG GGCGCTGTGC CGCTGCGACA TCGCGGCCGG CGCCAGCCGC CGGGCCCTGC TCGCCGATGG CATCCGCGTC ATGGTGGGCA GTCTGCCCGC GCTTGCCCGC ATGGCCCGGG GCTGGCTGGG CTTTGCCGTG TCGCCGCAAG GCCGGCTGCA CGGACAGGCT TGA
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Protein sequence | MMPEATRSAA GGRPYWNGTA VRSRLFDALS LLLPAGEAFL IETLQAWRAQ ASTPHDDALH DEIDRFIREE GAHQRAHARY NAALIAGLPG AEAVARRAER VAAGLADLGL PMQVALAAAF EQLTALVSRE IVEHDTLLVD DGSQPSRLWR WHAREELDHC DVALAVAARG APSRWLRRLA LVLATGYLAS DLVRYTWALC RCDIAAGASR RALLADGIRV MVGSLPALAR MARGWLGFAV SPQGRLHGQA
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