| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02027 |
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| Symbol | RSp0052 |
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| ID | 1222600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 57520 |
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| End bp | 58950 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239911 |
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| Product | metabolite transporter |
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| Protein accession | NP_521613 |
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| Protein GI | 17548273 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.158134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCA CTTTCCCTGC TGCCGCGCAG GCGAACGCCG CCGCGCGGCT CGAACGCCTG
CCGTTTTCCG GCTATCACAA GCGGATCTTC ATCATCATTG CGATCGCGTT CTTTTTTGAT
TCCGTCGATC TGGCCACGAT GACATTCGTG CTCGGCTCGA TCAAAAAGGA GTTCGGGCTG
TCCACCGCCA CGGCGGGCCT GGTGGCCAGC TCCAGCTTCT TCGGGATGGT GATCGGCGCG
GCGGTTGCCG GGCTGCTCGC AGATCGGTTC GGGCGTCGGC CGGTGTTTCA GTGGAGCATG
GTGCTGTGGG GCGTCGCGTC GTATCTGTGC TCGACCGCGC AGAGCGTGGA GGCGCTGATC
GCCTGGCGGA TATTGCTCGG CATCGGCATG GGTATGGAGT TTCCGGTAGC GCAGACGCTC
TTGTCCGAGT TCGTGCCGAC GGCAAACCGG GGGCGGCTGA TCGCGCTGAT GGATGGATTC
TGGCCGCTGG GCTTCATCAC GGCGGGCATC GTGTCGTATT TCGTACTGCC GCAGTTTGGG
TGGCGTGCGG TGTTTGCGCT GCTCGCGGTG CCGGCCATCT TTGTGTTGAT CGTGCGCCGC
GCGGTGCCGG AATCGCCGCG CTGGCTGGAA CACGCGGGCC GCAATGCGCA AGCCGACACG
GTCATGCGCG GCATCGAAGC CAAGGTGATG CGCTCGCTGA ACACCACAAC GCTGCCCCCG
ATCGTTCAGC ATTCCGCGCC ACAACCGGTG CGCCGGCACA GCGCGTTGCG AGAAATCTGG
AGCGCCGCGT ACCGCCGCCG CACGACGATG GTCTGGCTGC TATGGTTCTT TGCGCTGCTG
GGCTTCTATG GTTTGACGTC GTGGCTGGGC GCGCTGCTGC AGCAGGCGGG TTTTGCGGTC
ACGCAGTCGG TGTACTACAC GGTGCTGATC TCCCTGGGCG GCGTACCCGG CTTTCTGTGC
GCAGCATGGC TGGTCGAGCG TTGGGGGCGC AAGCCAACCT GCATTGCATC GCTGCTGGGT
GGTGGTGCCA TGGCTTACCT GTACGGCCAA AGTGCGCTGT ATGGCGGCAG CGTGACGCTG
CTGATCTGCA CGGGCCTGGC CATGCAGTTC TTCCTGTTCG GCATGTGGGC GGTGCTGTAC
ACCTACACGC CAGAGCAGTA CGGCACCGGC GCACGCGCAA CGGGCTCCGG CTTTGCCTCG
GCTATCGGCC GGGTCGGCTC GCTGATCGGG CCTTACGTGG TGGGCGTGGT GCTGCCCGTG
TTTGGCCAAG GCGGGGTGTT TACGTTGGGC GCCATCTCGT TTGCGGTTGC TGCGCTGGCG
GTGTGGGCAC TCGGTATCGA GACCCGGGGG CTTGCTCTGG AGGCATTGGC TTCGGAGGAT
GCGGCGGCTG AAACTGCGCC CTACTCAACC ACTGCAGACA ACATCTCCTA G
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| Protein sequence | MPATFPAAAQ ANAAARLERL PFSGYHKRIF IIIAIAFFFD SVDLATMTFV LGSIKKEFGL
STATAGLVAS SSFFGMVIGA AVAGLLADRF GRRPVFQWSM VLWGVASYLC STAQSVEALI
AWRILLGIGM GMEFPVAQTL LSEFVPTANR GRLIALMDGF WPLGFITAGI VSYFVLPQFG
WRAVFALLAV PAIFVLIVRR AVPESPRWLE HAGRNAQADT VMRGIEAKVM RSLNTTTLPP
IVQHSAPQPV RRHSALREIW SAAYRRRTTM VWLLWFFALL GFYGLTSWLG ALLQQAGFAV
TQSVYYTVLI SLGGVPGFLC AAWLVERWGR KPTCIASLLG GGAMAYLYGQ SALYGGSVTL
LICTGLAMQF FLFGMWAVLY TYTPEQYGTG ARATGSGFAS AIGRVGSLIG PYVVGVVLPV
FGQGGVFTLG AISFAVAALA VWALGIETRG LALEALASED AAAETAPYST TADNIS
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