Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01954 |
Symbol | RSp0754 |
ID | 1223061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 949909 |
End bp | 950547 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240614 |
Product | hypothetical protein |
Protein accession | NP_522315 |
Protein GI | 17548975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.091836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGCG GTTGGCTGCG GTCGGCCGCA GAGCCGCGTG TGCTGGTACG CCATCTGCAG AGCCTGATGC TGCCATCCGA ACCCCGTGTC GGGCGCCGAT ATCTGCGGCT GGCGGATCGT CGCGTGTTTG AGTGGATTTG GCCCGTGCTG TCGCCACTGC AGCGTCAGCA ATGGCTGGGG CCGATCAACC GATGGTGGGC GCTGAACCGG CGCAACGAGC TGGTCTTGCA CGCAATGACG GAGACCGTGC CGGGGGAGCC GCATCACGAT CCTGAACTGC TCACCACAGC ACAGTGGACG CGCTTGCACG ACTGCGAGCT TGCCCAGCAG ATCCTTCGCG GCTGGAGCGG CTTCGCCGAT CCACTGCCTG CCGACTACGT ACCGCAGGCA GAGCACGCCC TGCGTTCAGT GCGGTCGCTG GGCGTGGCCG AGCCCGCCGA CATCGTGCTG ATGAGCGCGT ATCAGCTGCA AATCCACCCC CGGTTCTGCG AGCACCCCCG CGTTGTCGAG CTGGTGCGCA CGGCGCAAAA CAGCGACGTG CCCTTGCAGG ATGCACTGGC CGGGATGCCC GATCCGGAAG GGTGGGATCG CATCCGGCAC GAATTGACGA CGGGCAGCCC GCCCAATCCG CTCGCCTGA
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Protein sequence | MIGGWLRSAA EPRVLVRHLQ SLMLPSEPRV GRRYLRLADR RVFEWIWPVL SPLQRQQWLG PINRWWALNR RNELVLHAMT ETVPGEPHHD PELLTTAQWT RLHDCELAQQ ILRGWSGFAD PLPADYVPQA EHALRSVRSL GVAEPADIVL MSAYQLQIHP RFCEHPRVVE LVRTAQNSDV PLQDALAGMP DPEGWDRIRH ELTTGSPPNP LA
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