Gene RS01892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01892 
SymbolRSp0815 
ID1223122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand- 
Start bp1028359 
End bp1028982 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID637240675 
Producttranscription regulator protein 
Protein accessionNP_522376 
Protein GI17549036 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00576188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.449964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA AGACGGAAGA AAAGCGGCAG TCCATCATCG ATGCCGCTTT CCACGTGTTC 
AGGGAAGTAG GTTTCGATCA GGCCTCGATG TCTGACATCG CCGCGCGCTC CGGCGCCTCC 
AAAGCCACGC TGTACAACTA CTTCAGCTCG AAAGAGGAGA TGTTCGCGGA GATCATGAGC 
GGCACCGCCG CGGACGAGAT ACGCGAGGCA TTCGCGCAGC TGAAATCTTC CGGGCCCGTG 
GCCGACACGC TTGTCGTCTT CGGCGAGCAC TACCTGAACG CCATCCTGCG GCCCTCGACG 
CTCGCGATCC GGCGCCTGGC AATCTGCGAA GGGGATCGCT CGAACCTCGG GCGCGCCTTT 
TACGAACACG GCCCCAAGCT CGGCTGGGCG ATGCTGGCGG AGTTTCTCCG CGAGGCCATG 
GAGGCCGGCG CGCTCAAGCA GCGCGACACC GATATCGCGG CGGCGCATCT TCACGCCCTC 
TACGAGGCGG AATGCGTGGA ACTGTGCCTG CTGGGCGTGC CGCTCGACAT CAGCCCGGGC 
CGGATCGCCG AGGGTGTCGC GCGAGCGGTC GATGTCTTCA TGGCCGCGTA CGGCGAGCCG 
CAGGCCGAAG GCCGGACACG CTGA
 
Protein sequence
MRKKTEEKRQ SIIDAAFHVF REVGFDQASM SDIAARSGAS KATLYNYFSS KEEMFAEIMS 
GTAADEIREA FAQLKSSGPV ADTLVVFGEH YLNAILRPST LAIRRLAICE GDRSNLGRAF 
YEHGPKLGWA MLAEFLREAM EAGALKQRDT DIAAAHLHAL YEAECVELCL LGVPLDISPG 
RIAEGVARAV DVFMAAYGEP QAEGRTR