Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01761 |
Symbol | RSp0688 |
ID | 1222995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 875403 |
End bp | 875900 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637240548 |
Product | hypothetical protein |
Protein accession | NP_522249 |
Protein GI | 17548909 |
COG category | [S] Function unknown |
COG ID | [COG5472] Predicted small integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.219891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATG CCCGTATCGC CAAGGCAGGC ATGGTGCTGG CCTTGGCGGC CTTTGCGCTG ATCGTTGCCT ACAACAACGT GGTGGATTTC CGCACCAACT ACGTCTTCGT CCAGCACGTG CTCAGCATGG ACACGGTGTT CCCGGACAGT ACGCTCAAGG GCCGGGCCAT CGTCTCCGAG CCGGTGTGGC TGGCGGCCTA TTGGCTGATC ATCGTGTGCG AGGCAGTGAT CGGGGCGCTG TTCCTGCTGG GGGGCGTTGC GATGTGGCGT GCGCGGCGTC TGCCGGCCGC GGCGTTCCGG CGCGCCAAGG CGCTGGTCTA CGCGGGGGCT ACGCTGAGCT TCCTGCTGTG GTTCTTCGGC TTCATGGTGG TGGGCGGCGA ATGGTTTCTG ATGTGGCAGT CGCGCACGTG GAACGGCCTC CAGTCGGCGT TCCGCATTGA CCTGTCGATC CTGGGCGTGC TGATCTTCGT CAATCAGCCG GATCCGGATG CGCCCTGA
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Protein sequence | MIDARIAKAG MVLALAAFAL IVAYNNVVDF RTNYVFVQHV LSMDTVFPDS TLKGRAIVSE PVWLAAYWLI IVCEAVIGAL FLLGGVAMWR ARRLPAAAFR RAKALVYAGA TLSFLLWFFG FMVVGGEWFL MWQSRTWNGL QSAFRIDLSI LGVLIFVNQP DPDAP
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