| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01751 |
|---|
| Symbol | RSp0698 |
|---|
| ID | 1223005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 886420 |
|---|
| End bp | 887544 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637240558 |
|---|
| Product | putative aminotransferase protein |
|---|
| Protein accession | NP_522259 |
|---|
| Protein GI | 17548919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.267131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.787087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTAC CATCCAACAG CTTCTGGGAG CAATGGCTCA CCGCGCATCG TGCCAAGCCC
GAGGCGTGCG TCACGTTCTC CCTCTCGCCG TCGCCGTTGC TGCAGGAATT CATCGCCGAG
CTCGACCCCG CCATCCCGCT CGACTGGTCG AGCGAGGACT ACCAGGGCGC GCTGGGGCTG
CGTGAACTGG TTCTCGACCG CTACGGCTAT CGCGGCGCGT GCGGCGTGGA CGACGTGCTG
ATCACCGCCG GCGCGCAGGA GGCGAACTAC CTGGCGCTCA CCCAGCTCCT GGGCCCCGGC
GATGAGTTCC TCATCGATGC CCCCGGGTGG CAGCAGCCGC TGGTCCTGGC CCGGCAGATC
GGCGCGACCG CGAAGCTCGT GCCGCGCTCG GAGGCCTCGG GCTGGGCGCT CGACGTGGAT
CAGCTCGAAG CGCTCGTCAC GCCCCGGACG AAGGCCATCT TCATCTGCAA CCCGAACAAT
CCCACGGGGC GCGTGGAGGA TGAGGCGACG CTGCGCCGGA TCATCGCCGC CGCCGACCGC
GTGGGGGCGT ACGTTCTGTC CGACGAGGTC TATCGCGGAC TCGAATGGAC CGACGTGGAA
ACGCCGCGCG TCGCCACGAT GTACGAGCGG GGCGTGAGCA CGGGCAGCGT CTCGAAACTC
CTGGGCCTGC AAGGGCTGCG CACCGGCTGG ATGGTGACGC GCGATCGCAG GCTCATCGCC
GATGCGATGG TCCTGCGGGA GAATACGAGC GAGATCATGA ACGTGATGGG CGAGCGCATC
TCGGAAGTCG CCCTCCAGCC CGCGCGCTTC GCCGCCGCGG TCGAGCGCTC GCGCGCTACC
GGCCGGGCAC GCATCGATCG GCTCGACCGG TTCGTCGCCG GCCAGCCGGC CCTGCGCTGG
CATCGGCCGG CCGCCGGCCT GCTCGGGCTT GCCCACCTCG ATCTGCCGAT GAGCGCCGAC
CGCTTCGCCG AGAAGCTCCT CGCGCCGCCG TACAACACGT TCGTGATGTC CGGCACCGCG
TACGACTGCC CGCAGCACCT GCGCCTCGGC GCGGGCGGCG TGTCGCACAC AGAGCTGGAG
CTCGGGCTTG AGCGGATGGC GCAGCTGCTC GCGGCGTGTT CATGA
|
|---|
| Protein sequence | MPVPSNSFWE QWLTAHRAKP EACVTFSLSP SPLLQEFIAE LDPAIPLDWS SEDYQGALGL
RELVLDRYGY RGACGVDDVL ITAGAQEANY LALTQLLGPG DEFLIDAPGW QQPLVLARQI
GATAKLVPRS EASGWALDVD QLEALVTPRT KAIFICNPNN PTGRVEDEAT LRRIIAAADR
VGAYVLSDEV YRGLEWTDVE TPRVATMYER GVSTGSVSKL LGLQGLRTGW MVTRDRRLIA
DAMVLRENTS EIMNVMGERI SEVALQPARF AAAVERSRAT GRARIDRLDR FVAGQPALRW
HRPAAGLLGL AHLDLPMSAD RFAEKLLAPP YNTFVMSGTA YDCPQHLRLG AGGVSHTELE
LGLERMAQLL AACS
|
|---|
| |