| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01745 |
|---|
| Symbol | RSp0704 |
|---|
| ID | 1223011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 892793 |
|---|
| End bp | 893728 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637240564 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_522265 |
|---|
| Protein GI | 17548925 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.264626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTACGCT CCCCGCACCT GCCGGCTCCC GCCATCCGCC AACTCGCGCC CCACGAGGTC
ATGGAGACAT CCGAAGTCGA ACACGACGCG CCGCCCCAGG GCGATGCCGA AGACGCCCCC
GCCGGTCGCG ATCGCGCCGG CATCCAGTCC ATCGAGGTGG GCGCGCAGTT GCTGGTCGCG
CTCACGCGGG CCTCGCACGC GATGGCGCTG GGCGACCTGG CGCGCGCGGC GGGCATGCAT
CCATCCAAGG CGCACCGCTA TCTGGTCAGC CTGCAGCGTG TCGGCGCGGT CTCGCAAGAC
CCGCTGACGA GCCGCTACGA ACTGGGCCCC TTCGCTCTGC GCCTGGGGCT GGCCGGCCTC
AACCGCGTCG AGGCCGTCAG CCGCACCCGC CCGCTGCTCG CCAGCCTGCG CGACCGCACC
GGCCACACCA TCGGCCTCGC GGTCTGGAGC GAGCGCGGCC CGACCGTGGT CCATTGGGAA
AAGGCCGGCG GCACGCCCGG CGTGAACCTG CGCATCGGCG ATGTGGCGCC GATGCTCAAT
TCCGCCACGG GCCGCCTGTT CGGCGCCTAT CTGCCGATCG AGCAGACGCT GCCGCTGGTG
GAGCGCGAAC TGCACGCGCG CACCAACGAT GACTTGCCGG GCCTGCCGCG CTCCCTGACC
GATTACTACC GGCTGTGCGA AGCGATCCGC GCCGAGGGCG CATCGTGGGT GTCGGGCAGC
CTGCTGCCCG GCGTGAACGC GCTGTCGCTG CCGGTGTTCG GCGCGCGCGG CGAGCTGGCG
CTGGTGCTGA TCGCGCTGAA CCTGCAGCCG CTGTTCGATG CCGGGCGCGG CGGCGAGCTG
GAGACGACGC TGCGCGCGTT CGTCGATCAG TTGTCCGCGA TGCTGCGCTC TCCGGTGCCT
GCGGCGGCCA GGGCCGGCGG CCGGCGCAGC CGCTGA
|
|---|
| Protein sequence | MLRSPHLPAP AIRQLAPHEV METSEVEHDA PPQGDAEDAP AGRDRAGIQS IEVGAQLLVA
LTRASHAMAL GDLARAAGMH PSKAHRYLVS LQRVGAVSQD PLTSRYELGP FALRLGLAGL
NRVEAVSRTR PLLASLRDRT GHTIGLAVWS ERGPTVVHWE KAGGTPGVNL RIGDVAPMLN
SATGRLFGAY LPIEQTLPLV ERELHARTND DLPGLPRSLT DYYRLCEAIR AEGASWVSGS
LLPGVNALSL PVFGARGELA LVLIALNLQP LFDAGRGGEL ETTLRAFVDQ LSAMLRSPVP
AAARAGGRRS R
|
|---|
| |