Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01688 |
Symbol | RSp0916 |
ID | 1223223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1155504 |
End bp | 1156394 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637240776 |
Product | lipoprotein |
Protein accession | NP_522477 |
Protein GI | 17549137 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACTA CTCATCTTAT TGTGATCGTC TTCTTTGCTC AATTCACTTC GGCATGCGCG GTTCAACCAA AAGCGCTACG GTCGAACCCC GACTCATCCT TCACTGGCAA AGCATCCGTC GACTTGCACG AACCGCCCCA TGGAGAAGAA GCAGATCTTC GGCAATTGAA AGTAGAGCAG CGGTCGGACG GAGATGAAAA GTCAGATCAT GGCGATAATC TTAATTCGGT CAACGTCGCT GGCGAGACTT CCCAGAAAAA CCCAAAACCA AGCAACATCG ACACCAATAG TGGCATTAGC GATCCGTGGG AGGGTTTCAA TCGGAAGACT CATGCCATAA ACAGCGTTCT GGACAAGTAC ATCGTTCGAC CAGTTGGCGT TGCTTACGAC GCAGTCACTC CAGACCCGGT GCAACATAGT GTTACGCGTT TCTTCGGAAA TTTGCGAGGC CCCAGCACTG TGGTCAATCA ACTGCTACAA GGAAAGCCCT TTAAGGCGGG ACAGTCGGTC AGCCGATTTG TCGTCAACAC CACCGTGGGA ATCGGTGGCC TGTTTGATCC CGCAAGCTCC CTCGGGCTGT CACGCGAAGA TGCAGATCTT GGTCAGACAT TCGCATCATG GGGTTGGCGT GATTCCCGCT ACATTGTTCT GCCTTTACTC GGCCCCACAA CACTACGTGA CGCCACCAGT ATGTTCGGAG AGCAGAAGCT GTCACCGACC AGCTATGTCA GCGACACCGC ACTTAAAACA GGATTGCAAT TTATTCAAAT AACAAATAAC AGGGCACGCT TGCTGGCGAG AGATGAAATT CGCAAGCAAT CCCTGGATGA CTATATTTTT GTTCGCGATG CGTGGACGAA ACGTCGCAAC CATCAGTTGT CAAAGGACTG A
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Protein sequence | MRTTHLIVIV FFAQFTSACA VQPKALRSNP DSSFTGKASV DLHEPPHGEE ADLRQLKVEQ RSDGDEKSDH GDNLNSVNVA GETSQKNPKP SNIDTNSGIS DPWEGFNRKT HAINSVLDKY IVRPVGVAYD AVTPDPVQHS VTRFFGNLRG PSTVVNQLLQ GKPFKAGQSV SRFVVNTTVG IGGLFDPASS LGLSREDADL GQTFASWGWR DSRYIVLPLL GPTTLRDATS MFGEQKLSPT SYVSDTALKT GLQFIQITNN RARLLARDEI RKQSLDDYIF VRDAWTKRRN HQLSKD
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