Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00883 |
Symbol | RSp0426 |
ID | 1222733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 540868 |
End bp | 541428 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637240286 |
Product | hypothetical protein |
Protein accession | NP_521987 |
Protein GI | 17548647 |
COG category | [S] Function unknown |
COG ID | [COG3247] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0347503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCATG CGCTTTCCAA ACTGTGGTGG GTGCTGGCCC TGCGCGGACT CTGCGCCATC GTGATCGGCA TCGGGGCGTT CGTGGTGCCG GCCGCGACGC TGGCTGTCCT GATCCTCGTA TTCGGGGCCT ATGCGCTGGT CGAGGGCGCC TTGCTGCTGG TGACCGCGCT CGGCAACCAT CGCGCCGCAC CGGACCGCTG GCCGCTGCTG CTGCAGGGCC TGCTGGGCGT GGCGGTGGGC ACGCTGACGC TGTTCAGCCC GGCCGTCACG GCGCTGGCCC TGCTGTTCTA CATCGCGGCG TGGCTGCTGG CCCACGGGGT GCTGCAGATC GTCGTGGCGG TACGCCTGCG CGAAGCGCTG AGCGGCGAGT GGTGGCTGAT CGCGTCGGGC GTGCTCAGCG TGCTGCTGTC GATCTGGCTG TTGTGGCAGC CGCAGGCCGG GGCGCTGGCG GTGCTGTGGT GGATCGGCGC GTGGGCGCTG GTCTGGGGCG CCGCGCTGGT CGGCGCCGCG CTGCGCATCC GCAGGTGGGC GCGCAGCGGC TCGGCCCGCG CCTTCGCGTA G
|
Protein sequence | MLHALSKLWW VLALRGLCAI VIGIGAFVVP AATLAVLILV FGAYALVEGA LLLVTALGNH RAAPDRWPLL LQGLLGVAVG TLTLFSPAVT ALALLFYIAA WLLAHGVLQI VVAVRLREAL SGEWWLIASG VLSVLLSIWL LWQPQAGALA VLWWIGAWAL VWGAALVGAA LRIRRWARSG SARAFA
|
| |