| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4386 |
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| Symbol | |
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| ID | 4024911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4852104 |
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| End bp | 4853321 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964596 |
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| Product | major facilitator transporter |
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| Protein accession | YP_571504 |
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| Protein GI | 91978845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCA TCCCGCCGGA TGACGAGACC TCGATCCGCT ATGGCGGCTG GCGCATCGTT
GCGGTGTGCT TTGCGGTCGC AACCTTCGGC TGGGCTTTCG GGTTCTATGG CCAGAGCGTC
TATCTCGCCG AGCTCACGCG CCTGCATGGC TGGCCGTCGT CGCTGATCGC CACCGCGACG
ACTTTCTTTT ATCTCGGCGG CGCGCTGCTG GTCGCCTTTG TGGGCGACGC GATCCGGATG
ATCGGCGCGC GCGCGTGCCT GCTCGGCGGC ATCGCCGCGA TGGCGCTCGG CACCGCGCTG
CTCGGCCGGA TCGATGCGCT GTGGCAGCTT TATGCCGTCT ACGTGCTGCT CGCGATCGGC
TGGGCCGGCA CCAGTCTCGG CGCGGTTACC AGCACGCTCG GCCTGTGGTT CGACCAGCGC
CGTGGCATGG CGATCAGCCT GGCGTTGAAC GGCGCGAGTT TCGGGGGCAT TGCCGGCGTG
CCGCTGTTGG TGGCGGCGAT CGAACATCTC GGTTTCGCCG GCGCCACGCT CGCGGCGGCG
GTCGTGTCCG TCGTCGTGCT GATGCCGATC GTGGCGATCT TCGTCGGCCG CCCGCCGCAG
CGCGCCGCTG CTCACGCTGC CGGGCCGGGT GCGGTGCAGG CCCTGTCGTC GGGCGCGATC
CGCCGGCATG CGTTCCGCGA CACCGCGTTC CTCACCGTCA CGATCGCCTT CGCGCTGGTG
CTGTTCGCGC AGGTCGGGTT CATCGTGCAC CTGATCGCCT ATCTCGATCC GCTGGTCGGC
CGCGAGCGCG CCGCGGTCGC GGTGTCGTTG CTGACGACGA TGGCGGTGGT CGGCCGCGTG
TCGCTGTCGA CCGTGATCGA TCGCCTCGAC CAGCGGCTGG TCTCGGCGAT CTCGTTTGCG
AGCCAGGCGG CGGCGCTGGC GATCGTGATC CTGTCGCGCG ACGCCACGCT GCTGCTGGTC
GCTTGCGCGC TGTTCGGCTT CTCGGTCGGC AATCTGATCA CGCTGCCGGC GCTGATCGTG
CAGCGCGAAT TCGCTCCCGG CTCGTTCGGC GTGCTGGTCA GCCTCAACAC CGCGATCAAT
CAGGTGACCT ACGCGTTCGG CCCGGGGGTG GTCGGCCTCC TCCGCGACGC TTCCGGCAGC
TACACGGCGC CGTTCCTCGG CTGCATCGCG CTACAACTGA TCGCCGCCAT GCTGGTGATG
GTGCGGGGGC GGAGCTAG
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| Protein sequence | MAAIPPDDET SIRYGGWRIV AVCFAVATFG WAFGFYGQSV YLAELTRLHG WPSSLIATAT
TFFYLGGALL VAFVGDAIRM IGARACLLGG IAAMALGTAL LGRIDALWQL YAVYVLLAIG
WAGTSLGAVT STLGLWFDQR RGMAISLALN GASFGGIAGV PLLVAAIEHL GFAGATLAAA
VVSVVVLMPI VAIFVGRPPQ RAAAHAAGPG AVQALSSGAI RRHAFRDTAF LTVTIAFALV
LFAQVGFIVH LIAYLDPLVG RERAAVAVSL LTTMAVVGRV SLSTVIDRLD QRLVSAISFA
SQAAALAIVI LSRDATLLLV ACALFGFSVG NLITLPALIV QREFAPGSFG VLVSLNTAIN
QVTYAFGPGV VGLLRDASGS YTAPFLGCIA LQLIAAMLVM VRGRS
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