Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4354 |
Symbol | |
ID | 4024878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4818748 |
End bp | 4819497 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637964563 |
Product | ABC transporter related |
Protein accession | YP_571472 |
Protein GI | 91978813 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.294486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGGTC CTGTCGCCGC GCTCGCGCTG CGGGGGTTGA TGAAAAGTTA CGACCGCCCC GCGGTCGACC GGCTCGACCT CGCCGTACGC GCCGGCGAGT TCTACGCGCT GCTCGGCCCC AACGGCGCCG GCAAGACCAC GACGCTGCGG ATGGTCGCGG GGCTGCTGAA GCCCGACGCC GGCTCGATCG ACATTCTGGG GATCGATGCG CTCGCCGATC CGGTCGCCGC CAAGCAGATC GTCGCCTGGG TCCCGGACGA GCCGATGATC TACGACAAGC TGACGCCGCT CGAATATCTC GCTTTCGTTG CCGGGCTGTG GGGCGTCGAT CCATCCGCGG CCGAAATCGC CGCGGAAAAA CTGCTCGACG ATCTCGGCCT CGGTCCGCAC GCGCATCAGC GCTGCGAGAG CTTCTCCAAG GGGATGCGGC AGAAGGTGGC GCTGGCCGGC GCGCTGGTGC ACGAGCCGCG ACTGATCATT CTCGACGAGC CGCTGACCGG CCTCGACGCG GTGTCGGCGC GCCGCGTGAA AGAGATCCTG CAGAGCCGCG TGCGGGCCGG CGCCACCGTG ATCATGACCA CGCATATCCT CGAAGTCGCC GAGCGGATGG CCGACCGGAT CGGCGTCATC ATCGCCGGTC GCCTCGTCGC AGAAGGCACG CTGACCGAAT TGCGAGGCGA GATCGGCCAG GGCGAGTCCA GCCTCGAGGA CATGTTCGTC GCGCTGGTCG ATAGCGAAGC GGCCGCATGA
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Protein sequence | MTGPVAALAL RGLMKSYDRP AVDRLDLAVR AGEFYALLGP NGAGKTTTLR MVAGLLKPDA GSIDILGIDA LADPVAAKQI VAWVPDEPMI YDKLTPLEYL AFVAGLWGVD PSAAEIAAEK LLDDLGLGPH AHQRCESFSK GMRQKVALAG ALVHEPRLII LDEPLTGLDA VSARRVKEIL QSRVRAGATV IMTTHILEVA ERMADRIGVI IAGRLVAEGT LTELRGEIGQ GESSLEDMFV ALVDSEAAA
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