| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4307 |
|---|
| Symbol | |
|---|
| ID | 4024831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4773918 |
|---|
| End bp | 4774658 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637964516 |
|---|
| Product | hemolysin A |
|---|
| Protein accession | YP_571425 |
|---|
| Protein GI | 91978766 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1189] Predicted rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.388226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGC CGACCGATCC ATCGCCCCGC AAACGCGCCG ATGTGGTGCT GGTCGAGCGC
GGCCTGTTCG AGAGCCGCGC CCGCGCGCAG GCGGCGATCG AAGCCGGGCT GGTGTTCGCG
GACGGCAAGC CGGTGACCAA GGTTTCCGAG CCGATCGCGC TCGACGCCGC GCTCGACGCG
CAGCCGGCGC ATCCATGGGT GTCGCGCGGC GGCGTCAAGC TCGCCGGCGC GCTTGAGCGC
TATCCGATCG AGATCGAGGA CCACGTCTGC CTCGATGTCG GCGCCTCCAC CGGCGGCTTC
ACCGACGTGC TGCTCGCCAA CGGCGCGGCG CTGGTGTTCG CGGTCGATGT CGGCCGCGCG
CAGTTGCACC CCTCGCTGCG CGGCCATCCG AAGATCGTGT CGATGGAAGC CACCGACATC
CGCAGCCTCG ACGGCAAGCG GCTGCCGCAG CGGCCCGATG TGGTGGTGAT CGACGCCAGT
TTCATCTCGC TGAAGCTGAT CCTTCCGACC GCGCTGACGC TCGCCGCCGC GCCGATGAGC
CTGCTGGCGC TGATCAAGCC GCAATTCGAA GCGCCGTCGA AGCACGGCAT CGTCCGCGAC
GCCGCGGTGC ATCGCGCGGT ATGCCGCGAC ATCGAAGCGC TCGCCGCCTC GCACGGCTGC
ACCGACATCA CCGTATTCCC ATCAAGCATC GCGGGCGGCG ACGGCAACAG CGAGTTCTTC
CTCGGCGCCC GGCGCGGCTG A
|
|---|
| Protein sequence | MAGPTDPSPR KRADVVLVER GLFESRARAQ AAIEAGLVFA DGKPVTKVSE PIALDAALDA
QPAHPWVSRG GVKLAGALER YPIEIEDHVC LDVGASTGGF TDVLLANGAA LVFAVDVGRA
QLHPSLRGHP KIVSMEATDI RSLDGKRLPQ RPDVVVIDAS FISLKLILPT ALTLAAAPMS
LLALIKPQFE APSKHGIVRD AAVHRAVCRD IEALAASHGC TDITVFPSSI AGGDGNSEFF
LGARRG
|
|---|
| |