Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4259 |
Symbol | |
ID | 4024780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4726820 |
End bp | 4727410 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637964465 |
Product | hypothetical protein |
Protein accession | YP_571377 |
Protein GI | 91978718 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.781376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.40781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATC GTCCAATATC GCGCCGTCAG GCGCTCGCAG CGTTCGGAGT GATCAGCGCC GGCGCGCTCG GTCTGCGCGC GATGCCCGCA CGCGCCCGGC CGGTGCTCGG CGACGACGGG CTGTACCAGC TCGACTGGTA TCTCCAGAGC TTCCTCGATC TGAAAGAGGA TCTCGAGGGC GCGACCGCAA AGGGGAAGCG CTTCGCCATC ATGTGGGGGC TGAAAGGCTG CCCGTCCTGC AAGAAGATGC ACGAGGTCCA CATGATGGAC CCGGCCATCG AGAGCTACAT CCGGGACAAT TTCGAGATCG TGCACCTCAA TCACATCGGC GACCGCGAGA TCACCGATTT CGACGGTAGC AAGTTCGGCG AGAAGGCGTT TGCTCAGGCC TACGGCGTTC GCTTCACGCC GACCGTGCAG TTCTTTCCGG AACGGATCGA CGGTCTGGCC GCGAAGAAAC CGCAGGAGCG GGAAGTCGTG CGGATGCCCG GCCTGCTGGA GCCGCCGGAA TTTCTCGCGA TGTTCCGCTA CGTCAGGGAG AAGGGCTATC TGTCGATGCC CTTCACCGAG TGGCTGAAGA AGCCGGTGTA G
|
Protein sequence | MIDRPISRRQ ALAAFGVISA GALGLRAMPA RARPVLGDDG LYQLDWYLQS FLDLKEDLEG ATAKGKRFAI MWGLKGCPSC KKMHEVHMMD PAIESYIRDN FEIVHLNHIG DREITDFDGS KFGEKAFAQA YGVRFTPTVQ FFPERIDGLA AKKPQEREVV RMPGLLEPPE FLAMFRYVRE KGYLSMPFTE WLKKPV
|
| |