Gene RPD_4208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4208 
Symbol 
ID4024729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4674385 
End bp4674936 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID637964414 
Producthypothetical protein 
Protein accessionYP_571326 
Protein GI91978667 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.735662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATTT TTCTCGGCAT CATCGTCGCG ATCGCGGTGT TCGCGCTGAT GACCTACAAC 
CGCCTGGTGG CGCTGCGACA GCGCGTCGGC CAGGCCTTCG CCGACATCGA CGTGCAACTC
AAGCAGCGGC ACGACCTCAT TCCCAATCTG ATCGAGACGG TGAAAGGCTA CGCAGCGCAT
GAGCGCGGTA CGCTCGACGA CGTCATCAAG GCGCGCAACG CCGCGATGTC GGCGCAGGGT
CCGGGCCAGG TCGCCGCCGC GGAGAACATG CTGACAGGCG CCCTCGGCAA GCTGATCGCA
CTGAGCGAGG CCTATCCGGA CCTCAAGGCC AACGCGAACT TCCAGCAGCT GCAGTCGGAG
TTGTCCGACA TCGAGAACAA GATCGCGGCG AGCCGCCGGT TCTTCAACAA TGCCGTGCAG
GAGTACAACA CCGGCATTCA ACAGATGCCC GCGGCCCTGT TCGCCGCGCC GCTCGGCTTC
ACCCACAAGG ACTATTTCGA CCTCGGCGAA ACCCGCAGCC AGGTCGAGCA GGTGCCGCAG
GTGAAGTTCT GA
 
Protein sequence
MWIFLGIIVA IAVFALMTYN RLVALRQRVG QAFADIDVQL KQRHDLIPNL IETVKGYAAH 
ERGTLDDVIK ARNAAMSAQG PGQVAAAENM LTGALGKLIA LSEAYPDLKA NANFQQLQSE
LSDIENKIAA SRRFFNNAVQ EYNTGIQQMP AALFAAPLGF THKDYFDLGE TRSQVEQVPQ
VKF