| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4171 |
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| Symbol | |
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| ID | 4024693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4637966 |
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| End bp | 4638712 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964379 |
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| Product | hypothetical protein |
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| Protein accession | YP_571291 |
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| Protein GI | 91978632 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.265987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.79352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGAC ATTCCCAATT CAAGAACATC ATGCACCGCA AGGGCAAGCA GGATGCCCAG
AGGTCCAAGG CGTTCAGCAA GCTGGCCCGC GAAATCACGG TCGCCGCCAA GCTCGGGACA
CCGGACCCGG CGATGAACCC GCGGCTCCGC GCCGCCGTGA TCGCCGCGCG GCAGGAGAAC
ATGCCGAAGG ACAATATCGA GCGCGCGATC AAGAAGGCGA TCGGCGGCGA CAGCGAGAAC
TATGACGAAA TCCGCTACGA GGGCTACGGC CCCGGCGGCG TCGCGGTGAT CGTCGAGGCG
CTGACCGACA ACCGCAACCG CGCCGCCTCC GACATCCGCT CCTATTTCAC CAAATCCGGC
GGCAATCTCG GCGAAACCGG CTCGGTTTCC TTCATGTTCG ACCGCACCGG CGTGATTGAA
TACGACGCCG GCAAAGCCTC CGCCGACGAC ATGCTGGACG CTGCGATCGA GGCCGGCGCC
GACGATGTGC TGTCGAGCGA AGGCGGCCAC GAGGTGTTCG CCTCGCAGGA AACCTTCCGC
GACGTCGCCA AGGCGCTCGA AGCCAAATTC GGCGAGCCGC GCAAGGCGGC CCTAATCTGG
AAGCCGCAGA ACACCGTCGC GGTCGACGAC GAGACCGGCG AGAAGCTGTT CAAGCTGATG
GAACATCTCA ACGAGCACGA CGACGTGCAG AACGTCTACG CGAACTTCGA AGTCTCCGAC
GCGCTGATGG CGAAGATGGC GGGGTAA
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| Protein sequence | MAGHSQFKNI MHRKGKQDAQ RSKAFSKLAR EITVAAKLGT PDPAMNPRLR AAVIAARQEN
MPKDNIERAI KKAIGGDSEN YDEIRYEGYG PGGVAVIVEA LTDNRNRAAS DIRSYFTKSG
GNLGETGSVS FMFDRTGVIE YDAGKASADD MLDAAIEAGA DDVLSSEGGH EVFASQETFR
DVAKALEAKF GEPRKAALIW KPQNTVAVDD ETGEKLFKLM EHLNEHDDVQ NVYANFEVSD
ALMAKMAG
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