Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4112 |
Symbol | |
ID | 4024634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4576423 |
End bp | 4577820 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964320 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_571232 |
Protein GI | 91978573 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCTT CACCAAGCGT TCGATCGCCG TCTTCGAAAT CCGGGGATCA AGACCTGTTC GATCAGTCCG CGCTGAGTAC GCTGGCGCAA CGTCTGGTCG ATGCGGCTTT GCGCGCCGGC GCCGATCAGG CGGATGCGGT CGCGGTGCGC GGCGTTTCGC ACGGCGTCGA AGTACGCGAT GGACGGATGC AGGAATCCGA GCGCTCCGAA GGCGACGACG TCGGCCTGCG CGTGCTGGTC GGCCGCCGCC AGGCGGTGGT CTCGACCAAC GACATCACGG GCGACGGCGT GTCCAAACTC GCCGAGCGCG CGGTGGCGAT GGCGCGCGTC GCGCCGGACG ACAAATATGT CGGCCTCGCC GATCCGGCCT TGCTGGCCCG CGACTTTCCC GAACTCGATA TGCTCGATCC GCAGACGCCG TCGACTGCGG AACTGGAACG CCGGGCGCGG GAAGCCGAGC AGGCTGCGCT CGCGGTCAAG GGCGTCAGCA AATCGGGCGG CGCATCGGCG TCGTCGGGCA TCGGCGGCAT GGTGCTGGTG ACGTCGACCG GCTTCCACGG CGCCTATCTG CGCTCGAGCC AGGGCATCTC GATGACCGCG ATCGCCGGCG ACGGCACCGG CATGGAGCGC GACTATGAAT ACACCACGGC GCCGCACGCC GAGGACCTGA TGTCGCCGGA AACCGTCGGC CGCGTCGCCG GCGAACGCAC CGCGGCGCGG GTGAATCCGC GCAAGGTCGA AACCTGCAAG GTGCCGGTGA TCTTCGATCC GCGCGTTGCC GGCTCGCTGG TCGGGCATCT GGTCAGCGCC GCCAACGGCG CCTCGATCGC GCGAAAAACC TCGTTTCTGA AAGATCGTCT CGGCGAGAAG CTGTTCCGTG ACGGCATCCG CATCATCGAC GATCCGCTGC GCAAGCGCGG GCTGCGCTCG CAGGCGTTCG ATGCCGAGGG CGTCGCGGTG AAGGAACTGG CGATCGTCGA TGACGGGGTG TTGACCACCT GGCTGCTCGA CTGTGCGACA GCGCGTGAAC TCGGGCTGAC CACCACCGGC CATGCGCATC GCGGCGTGTC CTCGTCGCCG TCGCCCGGCC CCTATAATCT GCATCTCGAA GGCGGCGCAA TCAGCCCCGC CGAACTGATG AGCGATATCA AGCAGGGCTT CTACGTCACC GATCTGATCG GCTCCGGCGT CAATGGCGTC ACCGGCGACT ACAGCCGCGG CGCTGCCGGG TTCTGGATCG AGAACGGCGA ATGCACCTAT GCGGTCAGCG AAGTCACCAT CGCCGGCCAT CTGATCGCGA TGTACAAGAC GCTGACGCCG GCCAACGATC TGACCTTCCG CTACGGCGTC AATGCTCCGA CGCTGCGGAT CGAGGGGCTG ACGATTGCCG GACGCTAG
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Protein sequence | MNSSPSVRSP SSKSGDQDLF DQSALSTLAQ RLVDAALRAG ADQADAVAVR GVSHGVEVRD GRMQESERSE GDDVGLRVLV GRRQAVVSTN DITGDGVSKL AERAVAMARV APDDKYVGLA DPALLARDFP ELDMLDPQTP STAELERRAR EAEQAALAVK GVSKSGGASA SSGIGGMVLV TSTGFHGAYL RSSQGISMTA IAGDGTGMER DYEYTTAPHA EDLMSPETVG RVAGERTAAR VNPRKVETCK VPVIFDPRVA GSLVGHLVSA ANGASIARKT SFLKDRLGEK LFRDGIRIID DPLRKRGLRS QAFDAEGVAV KELAIVDDGV LTTWLLDCAT ARELGLTTTG HAHRGVSSSP SPGPYNLHLE GGAISPAELM SDIKQGFYVT DLIGSGVNGV TGDYSRGAAG FWIENGECTY AVSEVTIAGH LIAMYKTLTP ANDLTFRYGV NAPTLRIEGL TIAGR
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