Gene RPD_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4096 
Symbol 
ID4024618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4559843 
End bp4560712 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID637964304 
Producthypothetical protein 
Protein accessionYP_571216 
Protein GI91978557 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.496795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCAT CGGTTCCGGG AACGGAAGGG CGCGCCTCAC AATTTCGTGC ACGTGACAGC 
CCCGGGCGGA ATCTCCTAAA CAGCCCCATG CCGAACGAAA TGCCTGCCTC GATCCCCGCC
TCGATCGCCT CGATCTACCG CTACCCGGTC AAAGGCCTGT CACCGGAACC GCTGCCGGAG
GTGGCGCTGA GCGCCGGGCA GACGCTGCCG GGGGACCGCG CATTCGCGAT CGAGAACGGG
CCGATCGGCT TCGACCCGGC CGCGCCGAAA TATTTCCCGA AAATCCGCTT CCTGATGCTG
ATGCGCAATG AGCGGCTGGC GGCCCTTCGC ACCCGCTACG ATGCGGCGAG CCGGCGATTG
ACGATCACCC GCAACGGCGC CGAGCTGGCG AGCGGCGACA TCTCCACCGA TGACGGCCGC
GCCGCCATCG AACGGTTCTT CGCCGCCGAC TTTGCCGAAG AACTGCGCGG GCCGCCGAAG
CTGCTGGAAG GCAGCGGCCA CAGCTTCTCG GACGTGGCCA TGAAAGTGGT GTCGATCATC
AATTTGGCCA GCGTCGCGGC GCTGGAGGGG ATGATCGGGC GAAAGGTCGA CCCGTTGCGC
TTCCGCGCCA ACCTCTATGT CGACGGCTGG CCGGCCTGGC ACGAATTCGA CCTGCTCGGC
CAGACGCTGT CGATCGGCGG CGCCCGGCTG AAGGTGGTGA AGCGCATCGT CCGCTGCGCC
GCCACCAATG TCGACCCGGA AACCGCCGCC CGCGACCTCA CGATTCCCGA GACGCTGCAG
CAGCAGCTCG GCCACGCCGA TTGCGGGGTC TATGCCGAGG TGTTGAGCGG CGGCCGGATC
GTGCAGGGCG ATGCGGTGGG CAACGCGTAG
 
Protein sequence
MWASVPGTEG RASQFRARDS PGRNLLNSPM PNEMPASIPA SIASIYRYPV KGLSPEPLPE 
VALSAGQTLP GDRAFAIENG PIGFDPAAPK YFPKIRFLML MRNERLAALR TRYDAASRRL
TITRNGAELA SGDISTDDGR AAIERFFAAD FAEELRGPPK LLEGSGHSFS DVAMKVVSII
NLASVAALEG MIGRKVDPLR FRANLYVDGW PAWHEFDLLG QTLSIGGARL KVVKRIVRCA
ATNVDPETAA RDLTIPETLQ QQLGHADCGV YAEVLSGGRI VQGDAVGNA