| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4046 |
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| Symbol | |
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| ID | 4024563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4495439 |
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| End bp | 4497808 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964249 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_571166 |
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| Protein GI | 91978507 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.236751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCC GCTTCAAGCG CGCCTTCCTG GTCGGAAGCG CAGCCTTCGC GGCCTCCGAA
GGCTTGCCGG CATCGCAGGC CCTCGCACAG CAGGCCGCCA CCGCATTGCC GGAAGTCGTC
GTCACCGCGC CGAGCCCGAT CGTGCGACGC CATTCGGCCC CGCCGTCACG ACCCGCGACG
CGGGTCGCCG CCCCCGCGCG CCAGCGCGGC ACCGCTCCGG CCGAGGCGCC GCCCGTCGTC
GCCCAGCCGG CGCCGCCGCC CCCCGGCGCG CTGCCGATCT TCACCGATCA GTTCGCGACC
GTTACCGTGG TCCCGAACGA GGAGATCCGG CGCAATGGCG GCGGCACGCT CGGCGACCTT
CTGAACAACA AGCCGGGCAT TACCGGCTCC GGCTACGCGC CGGGGGCCTC CAGCCGGCCG
ATCATCCGCG GCCTCGACGT CAACCGAGTC GGCATCGTCG AGAACGGCAT CGGCAGCAAC
GGCGCGTCCG ATCTCGGCGA AGACCATTTC GTCCCGATCG ATCCGCTCGC GACCAACCAG
GTCGAAGTGA TCCGCGGCCC GGCGACGCTG CGCTACGGCT CGACGGCGAT CGGCGGCGTG
GTCAGCGCCA GCAACAACCG CATCCCCGAC GCGCTGCCGC CCTGCGCGAC GCCGTTCCAG
AGCTACGGCC TGCCGGTGAA GGCGCCGGCT GCGATCGGCG GCGCGGCGGG CTGCATGAAC
GCCGAGGTCC GCAGTGCGAT GAGCTCGGTC GATCGCGGCG TCGAAAGCGC GGTGCTGCTG
GATGCCGGCG GCAACAACGT CGCGGTCCAT GCCGACGTGT TCGGCCGCAA TGCCGGCGAC
TATAACGTGC CGAGCTATCC GTATCAGGCG CCGGGACTCC CCTTCAACGG ACGCCAGCCC
AACTCCGCGA CGCAGGCGAC CGGCGCCTCG ATCGGCGGCT CCTATCTGTT CGACGGCGGC
TTCATCGGCG CGGCGATCAC GCAGAACAAT TCGGTCTATC GGATTCCCGG GACCGAGGGC
GCCGAATTCG GGACGCGGAT CGATGCGAAG CAGACCAAGG TCACCGCCAA GGGCGAGTAT
CGCCCGGATG CGGCGGCGAT CGAGGCGATC CGGTTCTGGG TCGGCGCCAC CGACTACAAG
CACAATGAGA TCGGCCTCGC CGTCGCAGGC GACCCGGCGT CCGATGGCGT GCGGCAGAGC
TTCACCAACA AGGAGCAAGA GGGCCGCCTC GAGGCGCAAC TGACGCCGTT CAATGCCCGC
TTCGCCACGG TCACGACGGC GGTGGGCGTG CAGGCCAGCC ACCAGGAACT GACAGCGCCC
AGCCCCGACG ATCCGACCAG CCCGCTCAAC GGGCTGTTCG ATCCCAATAA GAACACCAAG
CTCGCCGGCT ACGTCTTCAA CGAGCTGCGC TTCACCGAGA GCACCAAGGC GCAGGTGGCC
GGACGAATCG AGCACGTCGA CCTGTCCGGA ACGACGCCGG CTTTCGTACC CGGCCTGTTC
GACCTCTCCA CCGACCCCGG CGCGATCGGC CCTGCGACGT CGCGCAACCT GTCGTTCACG
CCGAAGAGCT TCAGCCTCGG CCTGATCCAG GCGTTGCCGT GGGGGCTTTC GGCCAGCATC
ACCGGGCAAT ATGTCGAGCG TGCGCCGAAG CCGGCGGAGC TGTTCTCGCG CGGCGGTCAC
GACGCCACCA CCACCTTCGA CATCGGCAAC CCCAATCTGG GGATCGAGAC GGCAAAATCG
GTCGAGGTCG GTTTGCGTCG GGCGGACGGC CCGTTCCGCT TCGAGATCAC CGCTTACTAC
ACGCAGTTCA GCGGCTTCAT CTATCGGCGG CTGACCGGCA ATAGCTGCGA CGACGTCTCT
TGCGTCGATC CGGCGACCGG CACGCTGGAA TTGAACCAGG CGATCTACGC GCAGCGCGAC
GCCACCTTCA GAGGCGGCGA ATTCCAGAGC CAGCTCGACG TGGCGCAAAT CTATGGCGGA
ACCTGGGGCA TCGAGAACCA GTTCGATGTC GTGCGGGCCA CCTTCGCAGA CGGCACCAAT
GTGCCGCGGA TCCCGCCGCT GCGGGTCGGC GGTGGATTGT TCTGGCGTGA CGCCAACTGG
CTGACCCGGA TCAACCTGTT GCACGCCTTC GCCCAGAACG ACGTCGCGCC GATCGCCGAG
ACAACCACCT CGGGCTACAA TCTGCTCAAG GCGGAGATCA GCTACCGGAC CAAGCTCGAT
CCGAACGCAT GGGGCGCCCG CGAGATGCTG GTCGGCCTTG TCGGCAACAA TCTGCTCAAC
GAGAACATCC GCAACGCGGT GTCCTACAGC AAGGACAACG TGCTGATGCC CGGCATCGGC
GTGCGGGCGT TCGCGAATCT GAAGTTCTGA
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| Protein sequence | MSLRFKRAFL VGSAAFAASE GLPASQALAQ QAATALPEVV VTAPSPIVRR HSAPPSRPAT
RVAAPARQRG TAPAEAPPVV AQPAPPPPGA LPIFTDQFAT VTVVPNEEIR RNGGGTLGDL
LNNKPGITGS GYAPGASSRP IIRGLDVNRV GIVENGIGSN GASDLGEDHF VPIDPLATNQ
VEVIRGPATL RYGSTAIGGV VSASNNRIPD ALPPCATPFQ SYGLPVKAPA AIGGAAGCMN
AEVRSAMSSV DRGVESAVLL DAGGNNVAVH ADVFGRNAGD YNVPSYPYQA PGLPFNGRQP
NSATQATGAS IGGSYLFDGG FIGAAITQNN SVYRIPGTEG AEFGTRIDAK QTKVTAKGEY
RPDAAAIEAI RFWVGATDYK HNEIGLAVAG DPASDGVRQS FTNKEQEGRL EAQLTPFNAR
FATVTTAVGV QASHQELTAP SPDDPTSPLN GLFDPNKNTK LAGYVFNELR FTESTKAQVA
GRIEHVDLSG TTPAFVPGLF DLSTDPGAIG PATSRNLSFT PKSFSLGLIQ ALPWGLSASI
TGQYVERAPK PAELFSRGGH DATTTFDIGN PNLGIETAKS VEVGLRRADG PFRFEITAYY
TQFSGFIYRR LTGNSCDDVS CVDPATGTLE LNQAIYAQRD ATFRGGEFQS QLDVAQIYGG
TWGIENQFDV VRATFADGTN VPRIPPLRVG GGLFWRDANW LTRINLLHAF AQNDVAPIAE
TTTSGYNLLK AEISYRTKLD PNAWGAREML VGLVGNNLLN ENIRNAVSYS KDNVLMPGIG
VRAFANLKF
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