Gene RPD_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3997 
Symbol 
ID4024514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4444157 
End bp4444624 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID637964200 
ProductMaoC-like dehydratase 
Protein accessionYP_571117 
Protein GI91978458 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC TCACCTTCGA AGATTTTCCC CCCGGTCACT TTGGCCACTT TGGACCTCGC 
CGCGTAACGC GCGAGGAAAT CACCGCGTTT GCCGCCGAAT TCGATCCGCA GCCGATGCAT
CTCGATGAAC GCGCGGCCGC GTCGTCGATG CTGAAGGGGC TGTCGGGATC GGGTTGGCAT
CTGTGCTCGA TCATGATGCG CATGATGTAT GACGGCTACA TCAAGAATAC CGCGTCGCTC
GGCTCGCCCG GCGTTAACGA GATGCGCTGG ATGGCGCCGT TCCGCCCTGG CGACGATCTC
ACCATCGACG TCGAGGTGGT CGAGGCGCGG GTGTCGAACA GCCGGCCCGA CACCGGCATC
GTCACCTTCA AGTGCTACGT CCGCAATGGC CGGGGCCAGA TGCTGTGCGA GATGGTGTCG
CCGATCATCA TCCGCCGCCG CGAGGCGGTC GCGAACGAAT CCAATTAG
 
Protein sequence
MTLLTFEDFP PGHFGHFGPR RVTREEITAF AAEFDPQPMH LDERAAASSM LKGLSGSGWH 
LCSIMMRMMY DGYIKNTASL GSPGVNEMRW MAPFRPGDDL TIDVEVVEAR VSNSRPDTGI
VTFKCYVRNG RGQMLCEMVS PIIIRRREAV ANESN